Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 Y_RNA.400-201ENST00000383963 111 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 RNU6-1145P-201ENST00000384246 107 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 SNORA1.3-201ENST00000384676 136 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 AC138623.1-201ENST00000418060 216 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 AC012306.1-201ENST00000423267 114 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 AC019205.3-201ENST00000424573 156 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 AL161651.1-201ENST00000440882 223 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 AC010095.1-201ENST00000443543 144 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 AP000705.1-201ENST00000454567 350 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 SNORD2.1-201ENST00000458762 69 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 AC022795.1-201ENST00000473808 480 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 RPS26P15-201ENST00000488067 348 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 RPS27P26-201ENST00000494583 239 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 SNORD116-25-201ENST00000516517 92 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.46□□□□□ -1.7
PTCD1O75127 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.46□□□□□ -1.7
PTCD1O75127 AC090897.2-201ENST00000581715 130 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.46□□□□□ -1.7
PTCD1O75127 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.46□□□□□ -1.7
PTCD1O75127 AC006001.4-201ENST00000622243 395 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 MIR4679-1-201ENST00000637619 75 ntBASIC4.46□□□□□ -1.7
PTCD1O75127 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
PTCD1O75127 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTCD1O75127 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 AC004944.1-201ENST00000517807 3059 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 AC010733.2-201ENST00000589496 5702 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
PTCD1O75127 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCD1O75127 Y_RNA.273-201ENST00000364703 102 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 RNU6-1175P-201ENST00000365200 107 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTCD1O75127 AL357075.1-201ENST00000404107 726 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 RNA5SP390-201ENST00000410191 113 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 Y_RNA.595-201ENST00000410403 105 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.45□□□□□ -1.7
PTCD1O75127 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.45□□□□□ -1.7
PTCD1O75127 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.45□□□□□ -1.7
PTCD1O75127 SNRPGP5-201ENST00000456003 220 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 SNORA31.16-201ENST00000516773 139 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 RNU6-579P-201ENST00000516879 102 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 AC233702.2-202ENST00000562547 291 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 MIR4423-201ENST00000580922 80 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 HSPE1P7-201ENST00000604681 321 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 AC010999.1-201ENST00000611856 324 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 MTND1P7-201ENST00000632801 297 ntBASIC4.45□□□□□ -1.7
PTCD1O75127 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PTCD1O75127 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCD1O75127 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.45□□□□□ -1.7
PTCD1O75127 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PTCD1O75127 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCD1O75127 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PTCD1O75127 MIR448-201ENST00000362131 111 ntBASIC4.44□□□□□ -1.7
PTCD1O75127 SNORD115-8-201ENST00000363856 82 ntBASIC4.44□□□□□ -1.7
PTCD1O75127 SNORD115-38-201ENST00000365037 82 ntBASIC4.44□□□□□ -1.7
PTCD1O75127 RNU6-622P-201ENST00000384272 103 ntBASIC4.44□□□□□ -1.7
PTCD1O75127 Y_RNA.570-201ENST00000384750 101 ntBASIC4.44□□□□□ -1.7
PTCD1O75127 EI24P2-201ENST00000397776 1076 ntBASIC4.44□□□□□ -1.7
PTCD1O75127 OOSP1P1-201ENST00000423265 274 ntBASIC4.44□□□□□ -1.7
PTCD1O75127 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.44□□□□□ -1.7
PTCD1O75127 FCF1P8-201ENST00000510322 597 ntBASIC4.44□□□□□ -1.7
PTCD1O75127 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.44□□□□□ -1.7
PTCD1O75127 MIR4276-201ENST00000584832 70 ntBASIC4.44□□□□□ -1.7
PTCD1O75127 AC008749.1-201ENST00000597650 306 ntBASIC4.44□□□□□ -1.7
PTCD1O75127 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.44□□□□□ -1.7
PTCD1O75127 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.44□□□□□ -1.7
PTCD1O75127 SCARNA15.3-201ENST00000626315 122 ntBASIC4.44□□□□□ -1.7
PTCD1O75127 SCARNA4.1-201ENST00000628597 123 ntBASIC4.44□□□□□ -1.7
PTCD1O75127 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.44□□□□□ -1.7
PTCD1O75127 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCD1O75127 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCD1O75127 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PTCD1O75127 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCD1O75127 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTCD1O75127 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.43□□□□□ -1.7
PTCD1O75127 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
PTCD1O75127 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCD1O75127 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCD1O75127 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCD1O75127 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PTCD1O75127 UBE2WP1-201ENST00000362030 340 ntBASIC4.43□□□□□ -1.7
PTCD1O75127 RNU6-1285P-201ENST00000363480 105 ntBASIC4.43□□□□□ -1.7
PTCD1O75127 MIR569-201ENST00000385228 96 ntBASIC4.43□□□□□ -1.7
PTCD1O75127 HSPE1P26-201ENST00000405341 275 ntBASIC4.43□□□□□ -1.7
PTCD1O75127 AL390729.2-201ENST00000416137 156 ntBASIC4.43□□□□□ -1.7
PTCD1O75127 AC008267.6-201ENST00000441664 139 ntBASIC4.43□□□□□ -1.7
PTCD1O75127 MRPS10P1-201ENST00000448483 130 ntBASIC4.43□□□□□ -1.7
PTCD1O75127 RPL23AP3-201ENST00000453844 468 ntBASIC4.43□□□□□ -1.7
PTCD1O75127 AC107626.1-201ENST00000471084 183 ntBASIC4.43□□□□□ -1.7
PTCD1O75127 AC090525.1-201ENST00000479116 478 ntBASIC4.43□□□□□ -1.7
PTCD1O75127 RPL30P14-201ENST00000482744 348 ntBASIC4.43□□□□□ -1.7
PTCD1O75127 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.43□□□□□ -1.7
PTCD1O75127 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCD1O75127 RNA5SP54-201ENST00000516951 92 ntBASIC4.43□□□□□ -1.7
PTCD1O75127 AC005176.2-201ENST00000596933 147 ntBASIC4.43□□□□□ -1.7
PTCD1O75127 AL137843.1-201ENST00000605078 385 ntBASIC4.43□□□□□ -1.7
PTCD1O75127 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTCD1O75127 ZNF204P-201ENST00000416749 2397 ntBASIC4.42□□□□□ -1.7
PTCD1O75127 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTCD1O75127 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms