Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MTND1P30-201ENST00000441241 901 ntBASIC1.06□□□□□ -2.24
SHOX2O60902 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.06□□□□□ -2.24
SHOX2O60902 AC087883.1-201ENST00000551882 391 ntBASIC1.06□□□□□ -2.24
SHOX2O60902 AC019288.1-201ENST00000557918 224 ntBASIC1.06□□□□□ -2.24
SHOX2O60902 MIR4999-201ENST00000585029 91 ntBASIC1.06□□□□□ -2.24
SHOX2O60902 AC018714.1-201ENST00000605028 208 ntBASIC1.06□□□□□ -2.24
SHOX2O60902 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.06□□□□□ -2.24
SHOX2O60902 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.06□□□□□ -2.24
SHOX2O60902 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.05□□□□□ -2.24
SHOX2O60902 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SHOX2O60902 RNU6-1141P-201ENST00000364520 107 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 RNU4-91P-201ENST00000364778 135 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 Y_RNA.518-201ENST00000384552 113 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 RNU2-3P-201ENST00000410144 191 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 RNU2-8P-201ENST00000410727 190 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 RNU2-7P-201ENST00000410794 178 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.05□□□□□ -2.24
SHOX2O60902 AC007283.2-201ENST00000424739 197 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 AL022238.1-201ENST00000442557 355 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 COX6CP14-201ENST00000469580 174 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 RPS23P4-201ENST00000487908 423 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 AC091951.3-201ENST00000504093 246 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 MTND3P25-201ENST00000509243 135 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 AC079140.3-201ENST00000511111 550 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.05□□□□□ -2.24
SHOX2O60902 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.05□□□□□ -2.24
SHOX2O60902 AC019176.1-201ENST00000518519 225 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 BNIP3P16-201ENST00000589779 534 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 AL078604.3-201ENST00000615580 211 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 AC138649.3-201ENST00000622154 254 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 AC097372.5-201ENST00000623665 376 ntBASIC1.05□□□□□ -2.24
SHOX2O60902 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SHOX2O60902 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SHOX2O60902 RNY1P12-201ENST00000364251 105 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 RNU6-1065P-201ENST00000384513 106 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 MIR620-201ENST00000385232 95 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.04□□□□□ -2.24
SHOX2O60902 Z99497.1-201ENST00000421282 135 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 EIF1P1-201ENST00000421436 341 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 RPL31P35-201ENST00000431058 377 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.04□□□□□ -2.24
SHOX2O60902 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.04□□□□□ -2.24
SHOX2O60902 AC074344.1-201ENST00000512823 224 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 AC109479.2-201ENST00000517842 174 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.04□□□□□ -2.24
SHOX2O60902 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.04□□□□□ -2.24
SHOX2O60902 AP003181.2-201ENST00000528941 181 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.04□□□□□ -2.24
SHOX2O60902 MIR3937-201ENST00000580135 106 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 AC073539.2-201ENST00000597113 165 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 AL590229.1-201ENST00000603497 542 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 AC090578.1-201ENST00000604955 591 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 AC138749.5-201ENST00000611461 208 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
SHOX2O60902 AC116165.2-201ENST00000616705 206 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 AC104010.1-201ENST00000616889 150 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 MIR6767-201ENST00000637302 66 ntBASIC1.04□□□□□ -2.24
SHOX2O60902 AC010615.1-201ENST00000594254 1764 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SHOX2O60902 MIR340-201ENST00000362125 95 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 Y_RNA.258-201ENST00000364613 105 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 RNU6-1187P-201ENST00000364771 110 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 SNORA32.2-201ENST00000384049 122 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 RPL37P10-201ENST00000412884 288 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 MTCO1P21-201ENST00000416634 589 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 TOMM22P2-201ENST00000430735 237 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 AL596276.1-201ENST00000434465 418 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 AC244670.1-201ENST00000436879 112 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 AC243964.1-201ENST00000441814 261 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 AC069257.2-201ENST00000441819 155 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 SNRPEP8-201ENST00000442866 260 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 UBE2V1P12-201ENST00000503954 474 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.03□□□□□ -2.24
SHOX2O60902 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.03□□□□□ -2.24
SHOX2O60902 AC104136.1-201ENST00000512969 394 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 RNU6-377P-201ENST00000515965 102 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.03□□□□□ -2.24
SHOX2O60902 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.03□□□□□ -2.24
SHOX2O60902 AC110760.3-201ENST00000598794 467 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 VN1R107P-201ENST00000601784 209 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 AL356157.2-201ENST00000605122 111 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 RPL17P51-201ENST00000605218 238 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 AC105129.3-201ENST00000605455 485 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 AC104073.3-201ENST00000610942 955 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 AC009878.1-201ENST00000621819 340 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 AC006927.3-201ENST00000638789 384 ntBASIC1.03□□□□□ -2.24
SHOX2O60902 Y_RNA.22-201ENST00000362492 102 ntBASIC1.02□□□□□ -2.25
SHOX2O60902 RNU5F-6P-201ENST00000362979 116 ntBASIC1.02□□□□□ -2.25
SHOX2O60902 RNU6-1019P-201ENST00000364424 107 ntBASIC1.02□□□□□ -2.25
SHOX2O60902 CYCSP33-201ENST00000414485 327 ntBASIC1.02□□□□□ -2.25
SHOX2O60902 AC078809.1-201ENST00000427601 140 ntBASIC1.02□□□□□ -2.25
SHOX2O60902 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.02□□□□□ -2.25
SHOX2O60902 MTND4P14-201ENST00000435799 1354 ntBASIC1.02□□□□□ -2.25
SHOX2O60902 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.02□□□□□ -2.25
SHOX2O60902 OR2A41P-201ENST00000473586 105 ntBASIC1.02□□□□□ -2.25
SHOX2O60902 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.02□□□□□ -2.25
SHOX2O60902 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.02□□□□□ -2.25
SHOX2O60902 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
SHOX2O60902 AL451064.1-201ENST00000607718 471 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms