Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MIR3658-201ENST00000636291 56 ntBASIC3.5□□□□□ -1.85
TRIM13O60858 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM13O60858 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM13O60858 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM13O60858 AC093908.1-201ENST00000623125 8092 ntBASIC3.5□□□□□ -1.85
TRIM13O60858 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM13O60858 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM13O60858 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM13O60858 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM13O60858 SPRR2C-201ENST00000290702 219 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 MIR372-201ENST00000362225 67 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 RNU1-13P-201ENST00000384499 162 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 MIR487A-201ENST00000385009 80 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM13O60858 RNA5SP44-201ENST00000410446 133 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 AC092047.1-201ENST00000424997 240 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM13O60858 SNRPEP9-201ENST00000436794 238 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM13O60858 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.49□□□□□ -1.85
TRIM13O60858 AL133162.1-201ENST00000463228 453 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 AC107027.2-201ENST00000512197 115 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 SNORA70.19-201ENST00000516717 90 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 RNU6-1282P-201ENST00000516735 96 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 RN7SKP289-201ENST00000517244 295 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 AC022616.8-201ENST00000533569 253 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM13O60858 MIR4679-2-201ENST00000578358 77 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 AC087499.8-201ENST00000578406 226 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 MIR3613-201ENST00000579844 87 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 TUG1_4.1-201ENST00000619464 181 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 AP003355.3-201ENST00000623465 114 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 MIR6830-201ENST00000636015 70 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM13O60858 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
TRIM13O60858 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM13O60858 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM13O60858 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
TRIM13O60858 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM13O60858 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM13O60858 AC118273.1-201ENST00000525324 3006 ntBASIC3.49□□□□□ -1.85
TRIM13O60858 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM13O60858 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM13O60858 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
TRIM13O60858 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM13O60858 SNORD115-8-201ENST00000363856 82 ntBASIC3.48□□□□□ -1.85
TRIM13O60858 SNORD115-38-201ENST00000365037 82 ntBASIC3.48□□□□□ -1.85
TRIM13O60858 RNU6-376P-201ENST00000384731 106 ntBASIC3.48□□□□□ -1.85
TRIM13O60858 RNU6-1064P-201ENST00000410626 104 ntBASIC3.48□□□□□ -1.85
TRIM13O60858 AC098614.2-201ENST00000426040 255 ntBASIC3.48□□□□□ -1.85
TRIM13O60858 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM13O60858 RPS4XP2-201ENST00000458402 793 ntBASIC3.48□□□□□ -1.85
TRIM13O60858 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.48□□□□□ -1.85
TRIM13O60858 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.48□□□□□ -1.85
TRIM13O60858 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM13O60858 AC016256.1-201ENST00000547971 354 ntBASIC3.48□□□□□ -1.85
TRIM13O60858 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM13O60858 AC127455.1-201ENST00000565496 145 ntBASIC3.48□□□□□ -1.85
TRIM13O60858 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.48□□□□□ -1.85
TRIM13O60858 SNORA43.4-201ENST00000629559 138 ntBASIC3.48□□□□□ -1.85
TRIM13O60858 MIR7153-201ENST00000637758 57 ntBASIC3.48□□□□□ -1.85
TRIM13O60858 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM13O60858 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.48□□□□□ -1.85
TRIM13O60858 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM13O60858 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM13O60858 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM13O60858 AC022336.2-201ENST00000568966 2538 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM13O60858 AL672296.1-201ENST00000427780 2158 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM13O60858 RNU1-75P-201ENST00000347264 129 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 Y_RNA.101-201ENST00000363154 102 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 RNU6-527P-201ENST00000363425 104 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 Y_RNA.172-201ENST00000363765 102 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 RNU6-755P-201ENST00000364400 103 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 SNORA72.2-201ENST00000365028 127 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 MIR325-201ENST00000385260 98 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 U3.19-201ENST00000390893 196 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM13O60858 RPL23AP95-201ENST00000426806 265 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM13O60858 AC243964.1-201ENST00000441814 261 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.47□□□□□ -1.85
TRIM13O60858 RPS20P10-201ENST00000451209 253 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 RNU7-197P-201ENST00000458836 62 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 Y_RNA.637-201ENST00000459424 114 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 AC021205.2-201ENST00000480069 347 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.47□□□□□ -1.85
TRIM13O60858 RN7SKP122-201ENST00000515923 296 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 RN7SKP164-201ENST00000516138 266 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 SNORA43.2-201ENST00000516652 128 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 MIR2276-201ENST00000516886 89 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM13O60858 DEFB117-201ENST00000602356 141 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 AL138963.2-201ENST00000605137 226 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM13O60858 XIST_intron.1-201ENST00000619444 68 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM13O60858 AL133383.2-201ENST00000622958 2336 ntBASIC3.47□□□□□ -1.85
TRIM13O60858 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms