Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SNORA36A-201ENST00000384221 132 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 MIR208B-201ENST00000401172 77 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 Y_RNA.592-201ENST00000410274 109 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 AC073901.1-201ENST00000462471 408 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 AC093852.1-201ENST00000503587 266 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 SCARNA15.1-201ENST00000516384 125 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDHGA12O60330 MIR2682-201ENST00000580305 110 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 MIR4672-201ENST00000583126 81 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 uc_338.1-201ENST00000612113 180 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 AC007485.1-201ENST00000616755 206 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 AC087588.2-201ENST00000617667 426 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 U2.1-201ENST00000618978 145 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 AC073476.4-201ENST00000628409 72 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 AL137790.1-201ENST00000634283 177 ntBASIC3.14□□□□□ -1.91
PCDHGA12O60330 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PCDHGA12O60330 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PCDHGA12O60330 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PCDHGA12O60330 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGA12O60330 AC093010.3-201ENST00000570269 15214 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGA12O60330 RNU1-70P-201ENST00000362618 164 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 Y_RNA.106-201ENST00000363189 100 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 SNORA5B-201ENST00000363786 132 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 U3.9-201ENST00000363823 204 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 RNU6-280P-201ENST00000364145 104 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 Y_RNA.424-201ENST00000384063 103 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 AL513477.1-202ENST00000417061 214 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGA12O60330 USP9YP16-201ENST00000430287 407 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 AL160004.2-201ENST00000432935 350 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 AC025750.2-201ENST00000442609 450 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.13□□□□□ -1.91
PCDHGA12O60330 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGA12O60330 USP9YP23-201ENST00000455085 407 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 CYP2C59P-201ENST00000457790 269 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 RNU7-87P-201ENST00000459343 62 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 AC007215.1-201ENST00000464893 276 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 TOMM22P6-201ENST00000465035 409 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGA12O60330 AC008885.1-201ENST00000514930 301 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 SNORA25.11-201ENST00000515935 105 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 RNU4-77P-201ENST00000516692 156 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHGA12O60330 EIF4A1P12-201ENST00000551910 141 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 HSBP1P1-201ENST00000555205 166 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 AC105245.1-201ENST00000581934 244 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 RPL12P50-201ENST00000603116 116 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 AC006023.1-201ENST00000603944 259 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 AC008121.3-201ENST00000618726 433 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 MIR5739-201ENST00000619803 80 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHGA12O60330 MIR4272-201ENST00000635924 64 ntBASIC3.13□□□□□ -1.91
PCDHGA12O60330 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGA12O60330 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGA12O60330 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGA12O60330 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PCDHGA12O60330 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHGA12O60330 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGA12O60330 U8.10-201ENST00000384260 133 ntBASIC3.12□□□□□ -1.91
PCDHGA12O60330 RNU6-1160P-201ENST00000384546 104 ntBASIC3.12□□□□□ -1.91
PCDHGA12O60330 RNU6-1093P-201ENST00000391194 107 ntBASIC3.12□□□□□ -1.91
PCDHGA12O60330 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.12□□□□□ -1.91
PCDHGA12O60330 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHGA12O60330 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGA12O60330 AL118496.2-201ENST00000448300 230 ntBASIC3.12□□□□□ -1.91
PCDHGA12O60330 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGA12O60330 RPL23AP70-201ENST00000483361 460 ntBASIC3.12□□□□□ -1.91
PCDHGA12O60330 RNU1-143P-201ENST00000516296 146 ntBASIC3.12□□□□□ -1.91
PCDHGA12O60330 SCARNA20.6-201ENST00000517251 106 ntBASIC3.12□□□□□ -1.91
PCDHGA12O60330 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGA12O60330 AC026470.2-201ENST00000561492 181 ntBASIC3.12□□□□□ -1.91
PCDHGA12O60330 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGA12O60330 MIR3199-1-201ENST00000582434 88 ntBASIC3.12□□□□□ -1.91
PCDHGA12O60330 UBL5P2-201ENST00000583788 219 ntBASIC3.12□□□□□ -1.91
PCDHGA12O60330 SNRPGP20-201ENST00000604477 205 ntBASIC3.12□□□□□ -1.91
PCDHGA12O60330 U1.23-201ENST00000610293 146 ntBASIC3.12□□□□□ -1.91
PCDHGA12O60330 PCGEM1.1-201ENST00000613431 131 ntBASIC3.12□□□□□ -1.91
PCDHGA12O60330 AC040896.1-201ENST00000613819 479 ntBASIC3.12□□□□□ -1.91
PCDHGA12O60330 RNU1-68P-201ENST00000615382 146 ntBASIC3.12□□□□□ -1.91
PCDHGA12O60330 U1.39-201ENST00000621562 146 ntBASIC3.12□□□□□ -1.91
PCDHGA12O60330 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGA12O60330 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
PCDHGA12O60330 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA12O60330 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA12O60330 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA12O60330 Y_RNA.216-201ENST00000364205 93 ntBASIC3.11□□□□□ -1.91
PCDHGA12O60330 RNA5SP240-201ENST00000365355 128 ntBASIC3.11□□□□□ -1.91
PCDHGA12O60330 MIR606-201ENST00000384851 96 ntBASIC3.11□□□□□ -1.91
PCDHGA12O60330 RNU1-139P-201ENST00000391307 165 ntBASIC3.11□□□□□ -1.91
PCDHGA12O60330 RNA5SP201-201ENST00000410316 124 ntBASIC3.11□□□□□ -1.91
PCDHGA12O60330 RNA5SP229-201ENST00000410809 99 ntBASIC3.11□□□□□ -1.91
PCDHGA12O60330 HMGB3P2-201ENST00000411913 584 ntBASIC3.11□□□□□ -1.91
PCDHGA12O60330 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGA12O60330 RPL30P4-201ENST00000429309 333 ntBASIC3.11□□□□□ -1.91
PCDHGA12O60330 AC140059.1-201ENST00000489238 361 ntBASIC3.11□□□□□ -1.91
PCDHGA12O60330 AC023141.11-201ENST00000508864 202 ntBASIC3.11□□□□□ -1.91
PCDHGA12O60330 RNU6-1114P-201ENST00000516022 107 ntBASIC3.11□□□□□ -1.91
PCDHGA12O60330 RNU6-58P-201ENST00000517143 103 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms