Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.21□□□□□ -2.44
SSSCA1O60232 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.21□□□□□ -2.44
SSSCA1O60232 AC104563.1-201ENST00000476147 376 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 AC108729.2-201ENST00000476543 840 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 RPL23AP54-201ENST00000495129 419 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.21□□□□□ -2.44
SSSCA1O60232 HMGB1P29-201ENST00000505659 499 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
SSSCA1O60232 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.21□□□□□ -2.44
SSSCA1O60232 AC106038.2-201ENST00000520706 568 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 AC027419.1-201ENST00000522976 328 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 AC141557.1-201ENST00000540982 400 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.21□□□□□ -2.44
SSSCA1O60232 AC021231.3-201ENST00000558497 370 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 MIR1273C-201ENST00000578669 77 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 MIR5190-201ENST00000581537 80 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 AL031775.1-201ENST00000607014 887 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 AP000676.3-201ENST00000623299 569 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 AC104985.3-201ENST00000623479 597 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 AL603839.4-201ENST00000624658 1005 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 SNORA33-201ENST00000363664 130 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 RNU6-744P-201ENST00000365557 107 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 RNU6-793P-201ENST00000384233 104 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 MIR598-201ENST00000384868 97 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 MIR193B-201ENST00000384907 83 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 RNA5SP109-201ENST00000391010 116 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 RNU6-177P-201ENST00000411257 104 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.22□□□□□ -2.44
SSSCA1O60232 AC027644.1-201ENST00000419595 298 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.22□□□□□ -2.44
SSSCA1O60232 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.22□□□□□ -2.44
SSSCA1O60232 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.22□□□□□ -2.44
SSSCA1O60232 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 AC022364.2-201ENST00000457963 554 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 RNU7-59P-201ENST00000459101 61 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 RNU6-953P-201ENST00000459154 107 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.22□□□□□ -2.44
SSSCA1O60232 RNU6-583P-201ENST00000516012 92 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 RNU1-86P-201ENST00000516108 154 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 RNU1-107P-201ENST00000516617 154 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.22□□□□□ -2.44
SSSCA1O60232 AC069113.3-201ENST00000521019 150 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 AP003072.2-201ENST00000527756 676 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
SSSCA1O60232 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.22□□□□□ -2.44
SSSCA1O60232 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.22□□□□□ -2.44
SSSCA1O60232 AL353149.1-201ENST00000610667 244 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 AC078938.1-201ENST00000620993 318 ntBASIC-0.22□□□□□ -2.44
SSSCA1O60232 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.23□□□□□ -2.45
SSSCA1O60232 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.23□□□□□ -2.45
SSSCA1O60232 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
SSSCA1O60232 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 RNU4-76P-201ENST00000364509 141 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 SNORD31B-201ENST00000364977 69 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 RNU6-395P-201ENST00000365662 106 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 RNA5SP504-201ENST00000410676 117 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 AC060773.1-201ENST00000421698 310 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.23□□□□□ -2.45
SSSCA1O60232 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.23□□□□□ -2.45
SSSCA1O60232 AC007395.1-201ENST00000451333 677 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 AC016925.1-201ENST00000458303 298 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 HMGB1P28-201ENST00000507778 552 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 SNORA43.2-201ENST00000516652 128 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 RNU6-914P-201ENST00000516749 109 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 RNU6-856P-201ENST00000516959 98 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 AC023827.1-201ENST00000569247 97 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 AL034555.1-201ENST00000604816 211 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 AC104408.1-201ENST00000605241 170 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 RPL21P136-201ENST00000605378 396 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 uc_338.34-201ENST00000617467 174 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 MIR6515-201ENST00000619843 57 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 CDR1-202ENST00000625883 1485 ntBASIC-0.23□□□□□ -2.45
SSSCA1O60232 RNU6-514P-201ENST00000384208 107 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 MIR19A-201ENST00000384878 82 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 RPS3AP36-201ENST00000398190 775 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 AL603865.2-201ENST00000401679 213 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 PDCL2P1-201ENST00000419302 352 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 MTCO2P34-201ENST00000421994 607 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.24□□□□□ -2.45
SSSCA1O60232 AC073261.1-201ENST00000429409 121 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.24□□□□□ -2.45
SSSCA1O60232 RPS25P9-201ENST00000435591 252 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.24□□□□□ -2.45
SSSCA1O60232 snoU13.25-201ENST00000458945 104 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 RNU7-14P-201ENST00000459331 62 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 AC091874.1-201ENST00000511402 339 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.24□□□□□ -2.45
SSSCA1O60232 AC016256.1-201ENST00000547971 354 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 AC022523.2-201ENST00000561045 150 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 AC131055.1-201ENST00000584626 316 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms