Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 EIF4EP2-201ENST00000422816 654 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.79□□□□□ -1.96
SMAD6O43541 NDUFB1P2-201ENST00000449477 176 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.79□□□□□ -1.96
SMAD6O43541 snoU13.28-201ENST00000459235 104 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 U8.21-201ENST00000459536 136 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.79□□□□□ -1.96
SMAD6O43541 AC103975.1-201ENST00000482506 483 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 AL160314.1-201ENST00000490836 438 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 AC139453.3-201ENST00000493276 369 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 RPS27P26-201ENST00000494583 239 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.79□□□□□ -1.96
SMAD6O43541 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.79□□□□□ -1.96
SMAD6O43541 RNA5SP76-201ENST00000516277 87 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 RNU6-570P-201ENST00000517051 105 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 RNA5SP290-201ENST00000517133 127 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 AC025755.1-201ENST00000521306 278 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 AMZ2P1-203ENST00000565833 850 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 RPS29P30-201ENST00000600975 111 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 AL390123.1-201ENST00000603216 237 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 AC008121.1-201ENST00000603244 268 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 AP000787.2-201ENST00000604432 568 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 AC096772.1-201ENST00000609146 564 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 MIR8076-201ENST00000611401 83 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 AC090132.2-201ENST00000615881 347 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 AC130454.1-201ENST00000622948 401 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SMAD6O43541 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
SMAD6O43541 AC062016.1-201ENST00000355719 319 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 SNORD50.1-201ENST00000362987 71 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 Y_RNA.105-201ENST00000363182 111 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 Y_RNA.471-201ENST00000384312 102 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 Y_RNA.562-201ENST00000384695 113 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 SNORA69.1-201ENST00000390904 137 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 RNU6-700P-201ENST00000391043 107 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 MIR548I3-201ENST00000408378 149 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 MIR548I1-201ENST00000408810 149 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 Y_RNA.592-201ENST00000410274 109 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 RNA5SP494-201ENST00000410653 129 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 RNA5SP21-201ENST00000410917 96 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 HMGN2P35-201ENST00000412164 270 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 MTCO3P19-201ENST00000415864 321 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 NDUFB4P7-201ENST00000423198 363 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 MTND3P9-201ENST00000429526 346 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 AL627311.1-201ENST00000431514 115 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 AC112220.1-201ENST00000434628 355 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.78□□□□□ -1.96
SMAD6O43541 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.78□□□□□ -1.96
SMAD6O43541 LINC01399-202ENST00000458450 244 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 SNORD109B-201ENST00000458961 67 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 SNORD109A-201ENST00000459128 67 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 AC090525.1-201ENST00000479116 478 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.78□□□□□ -1.96
SMAD6O43541 AK3P2-201ENST00000507976 429 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.78□□□□□ -1.96
SMAD6O43541 SNORA31.19-201ENST00000517079 126 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.78□□□□□ -1.96
SMAD6O43541 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.78□□□□□ -1.96
SMAD6O43541 AC007375.1-201ENST00000554513 578 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 AC005046.1-201ENST00000608515 625 ntBASIC2.78□□□□□ -1.96
SMAD6O43541 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.78□□□□□ -1.96
SMAD6O43541 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.78□□□□□ -1.96
SMAD6O43541 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SMAD6O43541 AP000560.1-201ENST00000624150 1937 ntBASIC2.78□□□□□ -1.97
SMAD6O43541 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.77□□□□□ -1.97
SMAD6O43541 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SMAD6O43541 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
SMAD6O43541 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SMAD6O43541 RNU6-428P-201ENST00000362942 107 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 AL590004.2-201ENST00000404787 371 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 AL603908.1-201ENST00000406098 201 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 RNU6-130P-201ENST00000411112 103 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.77□□□□□ -1.97
SMAD6O43541 AL590383.1-201ENST00000428602 75 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 SUMO1P3-201ENST00000439961 304 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 PIGFP3-201ENST00000441918 722 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 AC009296.1-201ENST00000443146 155 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 SUMO1P2-201ENST00000452524 304 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 RPL23AP70-201ENST00000483361 460 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.77□□□□□ -1.97
SMAD6O43541 RNU6-1023P-201ENST00000516137 106 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 RNU6-612P-201ENST00000516909 102 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 AC034114.1-201ENST00000520293 285 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 AP003733.2-201ENST00000529409 171 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 AC006023.1-201ENST00000603944 259 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 AC009318.2-201ENST00000610917 651 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 AC141273.2-201ENST00000618989 130 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 UCA1.1-201ENST00000620952 75 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 AC073308.1-201ENST00000623696 305 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 U6.104-201ENST00000637979 90 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SMAD6O43541 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.77□□□□□ -1.97
SMAD6O43541 MTND5P6-201ENST00000422338 1798 ntBASIC2.77□□□□□ -1.97
SMAD6O43541 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.76□□□□□ -1.97
SMAD6O43541 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SMAD6O43541 SNORA20.1-201ENST00000364790 130 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 RNU6-166P-201ENST00000384371 107 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms