Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SSXP5-201ENST00000443473 287 ntBASIC3.05□□□□□ -1.92
PROM1O43490 LINC01399-202ENST00000458450 244 ntBASIC3.05□□□□□ -1.92
PROM1O43490 RNU6-1132P-201ENST00000459214 107 ntBASIC3.05□□□□□ -1.92
PROM1O43490 AC087477.1-201ENST00000465747 340 ntBASIC3.05□□□□□ -1.92
PROM1O43490 AC097462.2-201ENST00000504623 481 ntBASIC3.05□□□□□ -1.92
PROM1O43490 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.05□□□□□ -1.92
PROM1O43490 AC023157.2-201ENST00000540596 141 ntBASIC3.05□□□□□ -1.92
PROM1O43490 AC093023.1-201ENST00000547375 507 ntBASIC3.05□□□□□ -1.92
PROM1O43490 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.05□□□□□ -1.92
PROM1O43490 HSPE1P4-201ENST00000550617 308 ntBASIC3.05□□□□□ -1.92
PROM1O43490 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.05□□□□□ -1.92
PROM1O43490 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.05□□□□□ -1.92
PROM1O43490 AC090617.3-201ENST00000573670 475 ntBASIC3.05□□□□□ -1.92
PROM1O43490 AC009163.5-201ENST00000575421 637 ntBASIC3.05□□□□□ -1.92
PROM1O43490 MIR2682-201ENST00000580305 110 ntBASIC3.05□□□□□ -1.92
PROM1O43490 MIR4325-201ENST00000583049 90 ntBASIC3.05□□□□□ -1.92
PROM1O43490 AC008739.2-201ENST00000597006 317 ntBASIC3.05□□□□□ -1.92
PROM1O43490 AC010620.2-201ENST00000600135 313 ntBASIC3.05□□□□□ -1.92
PROM1O43490 AC073410.2-201ENST00000603240 332 ntBASIC3.05□□□□□ -1.92
PROM1O43490 AL355877.2-201ENST00000603670 358 ntBASIC3.05□□□□□ -1.92
PROM1O43490 RPL23AP88-201ENST00000605759 454 ntBASIC3.05□□□□□ -1.92
PROM1O43490 AC002064.3-201ENST00000623448 346 ntBASIC3.05□□□□□ -1.92
PROM1O43490 U6.92-201ENST00000636464 89 ntBASIC3.05□□□□□ -1.92
PROM1O43490 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PROM1O43490 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
PROM1O43490 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PROM1O43490 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.05□□□□□ -1.92
PROM1O43490 AL353743.1-202ENST00000431724 1695 ntBASIC3.04□□□□□ -1.92
PROM1O43490 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.04□□□□□ -1.92
PROM1O43490 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
PROM1O43490 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.04□□□□□ -1.92
PROM1O43490 SNORA51.4-201ENST00000364993 124 ntBASIC3.04□□□□□ -1.92
PROM1O43490 Y_RNA.350-201ENST00000365409 98 ntBASIC3.04□□□□□ -1.92
PROM1O43490 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PROM1O43490 Y_RNA.458-201ENST00000384240 102 ntBASIC3.04□□□□□ -1.92
PROM1O43490 RNU6-611P-201ENST00000384276 104 ntBASIC3.04□□□□□ -1.92
PROM1O43490 RNU6-843P-201ENST00000384454 104 ntBASIC3.04□□□□□ -1.92
PROM1O43490 RNU6-541P-201ENST00000384709 110 ntBASIC3.04□□□□□ -1.92
PROM1O43490 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.04□□□□□ -1.92
PROM1O43490 RPL21P38-201ENST00000418090 167 ntBASIC3.04□□□□□ -1.92
PROM1O43490 AC007969.2-201ENST00000441891 191 ntBASIC3.04□□□□□ -1.92
PROM1O43490 GPM6BP3-201ENST00000442797 145 ntBASIC3.04□□□□□ -1.92
PROM1O43490 SNORD127-201ENST00000458892 86 ntBASIC3.04□□□□□ -1.92
PROM1O43490 AF186996.7-201ENST00000492781 209 ntBASIC3.04□□□□□ -1.92
PROM1O43490 RNU5F-8P-201ENST00000515941 111 ntBASIC3.04□□□□□ -1.92
PROM1O43490 MIR2355-201ENST00000517199 87 ntBASIC3.04□□□□□ -1.92
PROM1O43490 SNORA31.26-201ENST00000517250 137 ntBASIC3.04□□□□□ -1.92
PROM1O43490 SCARNA20.6-201ENST00000517251 106 ntBASIC3.04□□□□□ -1.92
PROM1O43490 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.04□□□□□ -1.92
PROM1O43490 AC006199.1-201ENST00000548728 219 ntBASIC3.04□□□□□ -1.92
PROM1O43490 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.04□□□□□ -1.92
PROM1O43490 AC091903.1-201ENST00000624322 454 ntBASIC3.04□□□□□ -1.92
PROM1O43490 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.04□□□□□ -1.92
PROM1O43490 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PROM1O43490 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
PROM1O43490 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
PROM1O43490 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PROM1O43490 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PROM1O43490 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PROM1O43490 AL365361.1-201ENST00000566942 3481 ntBASIC3.03□□□□□ -1.92
PROM1O43490 Y_RNA.105-201ENST00000363182 111 ntBASIC3.03□□□□□ -1.92
PROM1O43490 SNORD32A-201ENST00000364805 84 ntBASIC3.03□□□□□ -1.92
PROM1O43490 SNORD21-201ENST00000383953 95 ntBASIC3.03□□□□□ -1.92
PROM1O43490 Y_RNA.439-201ENST00000384119 94 ntBASIC3.03□□□□□ -1.92
PROM1O43490 SNORA29-201ENST00000384183 140 ntBASIC3.03□□□□□ -1.92
PROM1O43490 Y_RNA.477-201ENST00000384352 108 ntBASIC3.03□□□□□ -1.92
PROM1O43490 AL357075.1-201ENST00000404107 726 ntBASIC3.03□□□□□ -1.92
PROM1O43490 SDAD1P3-201ENST00000427380 333 ntBASIC3.03□□□□□ -1.92
PROM1O43490 AC104332.2-201ENST00000429959 156 ntBASIC3.03□□□□□ -1.92
PROM1O43490 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.03□□□□□ -1.92
PROM1O43490 Z75741.1-201ENST00000446793 314 ntBASIC3.03□□□□□ -1.92
PROM1O43490 TRBVB-201ENST00000477100 408 ntBASIC3.03□□□□□ -1.92
PROM1O43490 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.03□□□□□ -1.92
PROM1O43490 RPS27P26-201ENST00000494583 239 ntBASIC3.03□□□□□ -1.92
PROM1O43490 AC067942.3-201ENST00000512025 362 ntBASIC3.03□□□□□ -1.92
PROM1O43490 RNA5SP385-201ENST00000515947 110 ntBASIC3.03□□□□□ -1.92
PROM1O43490 ACA59.2-201ENST00000517061 156 ntBASIC3.03□□□□□ -1.92
PROM1O43490 SNORA31.23-201ENST00000517219 133 ntBASIC3.03□□□□□ -1.92
PROM1O43490 AP002770.2-201ENST00000543613 532 ntBASIC3.03□□□□□ -1.92
PROM1O43490 EIF4BP1-201ENST00000554881 351 ntBASIC3.03□□□□□ -1.92
PROM1O43490 LARP7P3-201ENST00000579888 337 ntBASIC3.03□□□□□ -1.92
PROM1O43490 AC096772.1-201ENST00000609146 564 ntBASIC3.03□□□□□ -1.92
PROM1O43490 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.03□□□□□ -1.92
PROM1O43490 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PROM1O43490 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PROM1O43490 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PROM1O43490 RNA5SP374-201ENST00000362939 125 ntBASIC3.02□□□□□ -1.93
PROM1O43490 RNU6-879P-201ENST00000364328 108 ntBASIC3.02□□□□□ -1.93
PROM1O43490 RNU6-17P-201ENST00000384245 107 ntBASIC3.02□□□□□ -1.93
PROM1O43490 RNY3P4-201ENST00000384428 101 ntBASIC3.02□□□□□ -1.93
PROM1O43490 RNU6-18P-201ENST00000384527 107 ntBASIC3.02□□□□□ -1.93
PROM1O43490 MIR153-2-201ENST00000385225 87 ntBASIC3.02□□□□□ -1.93
PROM1O43490 RN7SKP220-201ENST00000410611 288 ntBASIC3.02□□□□□ -1.93
PROM1O43490 Z96811.1-201ENST00000445880 108 ntBASIC3.02□□□□□ -1.93
PROM1O43490 RPL30P12-201ENST00000474666 353 ntBASIC3.02□□□□□ -1.93
PROM1O43490 AC098869.1-201ENST00000481627 292 ntBASIC3.02□□□□□ -1.93
PROM1O43490 RN7SL504P-201ENST00000494496 287 ntBASIC3.02□□□□□ -1.93
PROM1O43490 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.02□□□□□ -1.93
PROM1O43490 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.02□□□□□ -1.93
PROM1O43490 AC107222.1-201ENST00000510899 637 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms