Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.1□□□□□ -1.91
PRPF3O43395 AC011816.1-201ENST00000441346 546 ntBASIC3.1□□□□□ -1.91
PRPF3O43395 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.1□□□□□ -1.91
PRPF3O43395 MTCO3P10-201ENST00000455912 772 ntBASIC3.1□□□□□ -1.91
PRPF3O43395 FO393415.2-201ENST00000480085 343 ntBASIC3.1□□□□□ -1.91
PRPF3O43395 RPL30P10-201ENST00000488148 337 ntBASIC3.1□□□□□ -1.91
PRPF3O43395 AC097473.1-201ENST00000508142 408 ntBASIC3.1□□□□□ -1.91
PRPF3O43395 AC091874.1-201ENST00000511402 339 ntBASIC3.1□□□□□ -1.91
PRPF3O43395 AC018630.3-201ENST00000542637 96 ntBASIC3.1□□□□□ -1.91
PRPF3O43395 AC093249.1-201ENST00000567049 203 ntBASIC3.1□□□□□ -1.91
PRPF3O43395 AL356575.1-201ENST00000603008 283 ntBASIC3.1□□□□□ -1.91
PRPF3O43395 Z98751.3-201ENST00000604447 521 ntBASIC3.1□□□□□ -1.91
PRPF3O43395 AC022140.2-201ENST00000623500 188 ntBASIC3.1□□□□□ -1.91
PRPF3O43395 AC135776.4-201ENST00000624300 1904 ntBASIC3.1□□□□□ -1.91
PRPF3O43395 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.1□□□□□ -1.91
PRPF3O43395 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
PRPF3O43395 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PRPF3O43395 RNU5F-3P-201ENST00000363767 117 ntBASIC3.09□□□□□ -1.91
PRPF3O43395 RNU6-331P-201ENST00000384724 107 ntBASIC3.09□□□□□ -1.91
PRPF3O43395 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.09□□□□□ -1.91
PRPF3O43395 AC243428.1-201ENST00000421099 264 ntBASIC3.09□□□□□ -1.91
PRPF3O43395 AF228730.4-201ENST00000421457 183 ntBASIC3.09□□□□□ -1.91
PRPF3O43395 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.09□□□□□ -1.91
PRPF3O43395 ELOCP24-201ENST00000456370 334 ntBASIC3.09□□□□□ -1.91
PRPF3O43395 RN7SL297P-201ENST00000483161 293 ntBASIC3.09□□□□□ -1.91
PRPF3O43395 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.09□□□□□ -1.91
PRPF3O43395 RNA5SP384-201ENST00000516615 116 ntBASIC3.09□□□□□ -1.91
PRPF3O43395 RPPH1-2P-201ENST00000516688 293 ntBASIC3.09□□□□□ -1.91
PRPF3O43395 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.09□□□□□ -1.91
PRPF3O43395 AL713866.2-201ENST00000603579 219 ntBASIC3.09□□□□□ -1.91
PRPF3O43395 AL138963.2-201ENST00000605137 226 ntBASIC3.09□□□□□ -1.91
PRPF3O43395 RPL23AP88-201ENST00000605759 454 ntBASIC3.09□□□□□ -1.91
PRPF3O43395 RMST_6.1-201ENST00000611980 203 ntBASIC3.09□□□□□ -1.91
PRPF3O43395 AL160413.1-201ENST00000622780 310 ntBASIC3.09□□□□□ -1.91
PRPF3O43395 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PRPF3O43395 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PRPF3O43395 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRPF3O43395 RNU1-72P-201ENST00000362976 153 ntBASIC3.08□□□□□ -1.92
PRPF3O43395 RNU6-595P-201ENST00000363944 107 ntBASIC3.08□□□□□ -1.92
PRPF3O43395 SNORA75.6-201ENST00000391318 127 ntBASIC3.08□□□□□ -1.92
PRPF3O43395 MIR320B2-201ENST00000408479 138 ntBASIC3.08□□□□□ -1.92
PRPF3O43395 HMGB3P2-201ENST00000411913 584 ntBASIC3.08□□□□□ -1.92
PRPF3O43395 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.08□□□□□ -1.92
PRPF3O43395 AC104389.3-201ENST00000445629 235 ntBASIC3.08□□□□□ -1.92
PRPF3O43395 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.08□□□□□ -1.92
PRPF3O43395 RNU7-152P-201ENST00000458982 64 ntBASIC3.08□□□□□ -1.92
PRPF3O43395 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.08□□□□□ -1.92
PRPF3O43395 SCARNA16.2-201ENST00000516520 172 ntBASIC3.08□□□□□ -1.92
PRPF3O43395 AL590705.4-201ENST00000532209 134 ntBASIC3.08□□□□□ -1.92
PRPF3O43395 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.08□□□□□ -1.92
PRPF3O43395 MIR7106-201ENST00000612419 65 ntBASIC3.08□□□□□ -1.92
PRPF3O43395 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.08□□□□□ -1.92
PRPF3O43395 HMGB1P24-202ENST00000615653 685 ntBASIC3.08□□□□□ -1.92
PRPF3O43395 AL450472.1-202ENST00000637286 180 ntBASIC3.08□□□□□ -1.92
PRPF3O43395 AL161431.1-201ENST00000618966 4205 ntBASIC3.08□□□□□ -1.92
PRPF3O43395 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.08□□□□□ -1.92
PRPF3O43395 MTND5P10-201ENST00000603719 1809 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.07□□□□□ -1.92
PRPF3O43395 U3.9-201ENST00000363823 204 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 RNU6-694P-201ENST00000364071 147 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 RNU6-890P-201ENST00000384121 107 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 MIR561-201ENST00000385216 97 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 Y_RNA.579-201ENST00000390939 94 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 RNA5SP201-201ENST00000410316 124 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 RPL23AP50-201ENST00000434149 455 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.07□□□□□ -1.92
PRPF3O43395 OR2AQ1P-201ENST00000451972 200 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.07□□□□□ -1.92
PRPF3O43395 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.07□□□□□ -1.92
PRPF3O43395 RNU7-175P-201ENST00000515915 61 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 RNU6-264P-201ENST00000517134 104 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 HSPE1P20-201ENST00000538133 289 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 AC104581.2-201ENST00000572227 430 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 MIR4635-201ENST00000583759 79 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 AC080078.3-201ENST00000605407 463 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 AC092608.2-201ENST00000624427 218 ntBASIC3.07□□□□□ -1.92
PRPF3O43395 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PRPF3O43395 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
PRPF3O43395 Y_RNA.48-201ENST00000362710 103 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 Y_RNA.146-201ENST00000363549 102 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 Y_RNA.187-201ENST00000363918 113 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 Y_RNA.813-201ENST00000364639 102 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 Y_RNA.533-201ENST00000384596 114 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 RNU6-700P-201ENST00000391043 107 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 AL358453.1-201ENST00000422522 250 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 MTCYBP10-201ENST00000424905 650 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.06□□□□□ -1.92
PRPF3O43395 snoU13.30-201ENST00000458951 104 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 SNORD109B-201ENST00000458961 67 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 SNORD109A-201ENST00000459128 67 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 RPL23AP75-201ENST00000491601 451 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 SNORA31.16-201ENST00000516773 139 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 RNA5SP54-201ENST00000516951 92 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.06□□□□□ -1.92
PRPF3O43395 CBX3P8-201ENST00000532412 525 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 EIF4A1P12-201ENST00000551910 141 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 AC026470.2-201ENST00000561492 181 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 AC023043.3-201ENST00000593113 385 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms