Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 RN7SL722P-201ENST00000617780 284 ntBASIC7.18□□□□□ -1.26
MSH5O43196 RN7SL565P-201ENST00000618246 284 ntBASIC7.18□□□□□ -1.26
MSH5O43196 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
MSH5O43196 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
MSH5O43196 AC093591.2-201ENST00000565254 3843 ntBASIC7.18□□□□□ -1.26
MSH5O43196 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.18□□□□□ -1.26
MSH5O43196 AL161912.2-201ENST00000565707 3007 ntBASIC7.17□□□□□ -1.26
MSH5O43196 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
MSH5O43196 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC7.17□□□□□ -1.26
MSH5O43196 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
MSH5O43196 RNU6-811P-201ENST00000384069 107 ntBASIC7.17□□□□□ -1.26
MSH5O43196 SNORA67-201ENST00000384423 137 ntBASIC7.17□□□□□ -1.26
MSH5O43196 RNU6-1197P-201ENST00000391183 107 ntBASIC7.17□□□□□ -1.26
MSH5O43196 MIR942-201ENST00000401111 86 ntBASIC7.17□□□□□ -1.26
MSH5O43196 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC7.17□□□□□ -1.26
MSH5O43196 snoU13.20-201ENST00000459180 104 ntBASIC7.17□□□□□ -1.26
MSH5O43196 SNORA18.5-201ENST00000516616 101 ntBASIC7.17□□□□□ -1.26
MSH5O43196 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC7.17□□□□□ -1.26
MSH5O43196 MIR6841-201ENST00000637129 72 ntBASIC7.17□□□□□ -1.26
MSH5O43196 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
MSH5O43196 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
MSH5O43196 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
MSH5O43196 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
MSH5O43196 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
MSH5O43196 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC7.17□□□□□ -1.26
MSH5O43196 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
MSH5O43196 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC7.17□□□□□ -1.26
MSH5O43196 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
MSH5O43196 FHIT-201ENST00000341848 174 ntTSL 3 BASIC7.16□□□□□ -1.26
MSH5O43196 RNU6-1084P-201ENST00000362498 107 ntBASIC7.16□□□□□ -1.26
MSH5O43196 SNORD113-4-201ENST00000364802 75 ntBASIC7.16□□□□□ -1.26
MSH5O43196 SNORD38.2-201ENST00000384470 69 ntBASIC7.16□□□□□ -1.26
MSH5O43196 SNORD116-24-201ENST00000384549 92 ntBASIC7.16□□□□□ -1.26
MSH5O43196 RNU6-466P-201ENST00000391224 103 ntBASIC7.16□□□□□ -1.26
MSH5O43196 DBIP2-201ENST00000419076 262 ntBASIC7.16□□□□□ -1.26
MSH5O43196 RPPH1-2P-201ENST00000516688 293 ntBASIC7.16□□□□□ -1.26
MSH5O43196 AP004371.1-201ENST00000525240 214 ntBASIC7.16□□□□□ -1.26
MSH5O43196 MIR4716-201ENST00000579628 84 ntBASIC7.16□□□□□ -1.26
MSH5O43196 MIR3199-2-201ENST00000636243 86 ntBASIC7.16□□□□□ -1.26
MSH5O43196 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC7.16□□□□□ -1.26
MSH5O43196 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC7.16□□□□□ -1.26
MSH5O43196 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
MSH5O43196 AP005432.1-201ENST00000580891 3485 ntBASIC7.16□□□□□ -1.26
MSH5O43196 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
MSH5O43196 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
MSH5O43196 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
MSH5O43196 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
MSH5O43196 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC7.16□□□□□ -1.26
MSH5O43196 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
MSH5O43196 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
MSH5O43196 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
MSH5O43196 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
MSH5O43196 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
MSH5O43196 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
MSH5O43196 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
MSH5O43196 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.26
MSH5O43196 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC7.15□□□□□ -1.26
MSH5O43196 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
MSH5O43196 RNA5SP30-201ENST00000365552 115 ntBASIC7.15□□□□□ -1.26
MSH5O43196 RNU6-160P-201ENST00000384591 107 ntBASIC7.15□□□□□ -1.26
MSH5O43196 AC091390.1-201ENST00000433904 331 ntBASIC7.15□□□□□ -1.26
MSH5O43196 RPS29P33-201ENST00000456717 146 ntBASIC7.15□□□□□ -1.26
MSH5O43196 BX284632.1-201ENST00000478218 541 ntBASIC7.15□□□□□ -1.26
MSH5O43196 MIR3152-201ENST00000579801 74 ntBASIC7.15□□□□□ -1.26
MSH5O43196 YWHAEP2-201ENST00000580066 112 ntBASIC7.15□□□□□ -1.26
MSH5O43196 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC7.15□□□□□ -1.26
MSH5O43196 YWHAEP3-201ENST00000582767 121 ntBASIC7.15□□□□□ -1.26
MSH5O43196 MIR3936-201ENST00000584304 110 ntBASIC7.15□□□□□ -1.26
MSH5O43196 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
MSH5O43196 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
MSH5O43196 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
MSH5O43196 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
MSH5O43196 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
MSH5O43196 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
MSH5O43196 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC7.14□□□□□ -1.27
MSH5O43196 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MSH5O43196 Y_RNA.494-201ENST00000384432 111 ntBASIC7.14□□□□□ -1.27
MSH5O43196 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC7.14□□□□□ -1.27
MSH5O43196 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC7.14□□□□□ -1.27
MSH5O43196 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
MSH5O43196 RNU4ATAC6P-201ENST00000516592 126 ntBASIC7.14□□□□□ -1.27
MSH5O43196 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
MSH5O43196 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC7.14□□□□□ -1.27
MSH5O43196 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC7.13□□□□□ -1.27
MSH5O43196 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC7.13□□□□□ -1.27
MSH5O43196 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MSH5O43196 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
MSH5O43196 Y_RNA.98-201ENST00000363109 102 ntBASIC7.13□□□□□ -1.27
MSH5O43196 RNU1-136P-201ENST00000384181 164 ntBASIC7.13□□□□□ -1.27
MSH5O43196 RNU6-1181P-201ENST00000384191 106 ntBASIC7.13□□□□□ -1.27
MSH5O43196 MIR551A-201ENST00000385042 96 ntBASIC7.13□□□□□ -1.27
MSH5O43196 AL356535.1-201ENST00000440335 398 ntBASIC7.13□□□□□ -1.27
MSH5O43196 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC7.13□□□□□ -1.27
MSH5O43196 RNU1-30P-201ENST00000606575 163 ntBASIC7.13□□□□□ -1.27
MSH5O43196 AL512598.1-201ENST00000610158 273 ntBASIC7.13□□□□□ -1.27
MSH5O43196 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MSH5O43196 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
MSH5O43196 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
MSH5O43196 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
MSH5O43196 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms