Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXN1O15353 Y_RNA.644-201ENST00000459006 113 ntBASIC3.38□□□□□ -1.87
FOXN1O15353 RN7SL633P-201ENST00000488974 297 ntBASIC3.38□□□□□ -1.87
FOXN1O15353 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXN1O15353 Y_RNA.674-201ENST00000516362 113 ntBASIC3.38□□□□□ -1.87
FOXN1O15353 SCARNA24.2-201ENST00000516968 130 ntBASIC3.38□□□□□ -1.87
FOXN1O15353 RNA5SP471-201ENST00000516971 106 ntBASIC3.38□□□□□ -1.87
FOXN1O15353 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXN1O15353 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FOXN1O15353 MIR4300-201ENST00000581016 96 ntBASIC3.38□□□□□ -1.87
FOXN1O15353 AC009314.1-201ENST00000603871 304 ntBASIC3.38□□□□□ -1.87
FOXN1O15353 MIR376A1-201ENST00000616574 68 ntBASIC3.38□□□□□ -1.87
FOXN1O15353 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXN1O15353 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXN1O15353 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FOXN1O15353 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXN1O15353 AC096644.4-201ENST00000563417 2912 ntBASIC3.38□□□□□ -1.87
FOXN1O15353 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXN1O15353 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
FOXN1O15353 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
FOXN1O15353 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
FOXN1O15353 SNORD50.1-201ENST00000362987 71 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 Y_RNA.83-201ENST00000363005 113 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 Y_RNA.143-201ENST00000363520 106 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 RNU6-512P-201ENST00000364438 103 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 Y_RNA.291-201ENST00000364886 113 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 Y_RNA.439-201ENST00000384119 94 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 RNU6-1181P-201ENST00000384191 106 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 SNORA36C-201ENST00000384289 132 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 Y_RNA.506-201ENST00000384494 102 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 MIR181B1-201ENST00000385240 110 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 MRPL35P1-201ENST00000404272 572 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 Y_RNA.793-201ENST00000411222 111 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 SNRPGP5-201ENST00000456003 220 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 AC091179.1-201ENST00000461606 579 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 AP004217.1-201ENST00000480579 346 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 AL359273.1-201ENST00000510918 627 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 AC107393.1-201ENST00000512403 346 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 Y_RNA.703-201ENST00000516846 111 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 AP004242.1-201ENST00000533701 349 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 SYF2P1-201ENST00000550658 413 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 MIR1273C-201ENST00000578669 77 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXN1O15353 MIR8076-201ENST00000611401 83 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 AL360181.4-201ENST00000621752 134 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 U6.92-201ENST00000636464 89 ntBASIC3.37□□□□□ -1.87
FOXN1O15353 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
FOXN1O15353 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
FOXN1O15353 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
FOXN1O15353 AP003122.5-201ENST00000527668 3766 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXN1O15353 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.36□□□□□ -1.87
FOXN1O15353 SNORD81.1-201ENST00000363064 77 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 RNU6-384P-201ENST00000364900 104 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 Y_RNA.358-201ENST00000365491 99 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 RNU6-827P-201ENST00000365553 106 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 RNU6-1074P-201ENST00000383995 104 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 Y_RNA.541-201ENST00000384640 113 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 RPS29P13-201ENST00000402041 169 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 RNA5SP425-201ENST00000410336 112 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 RNU2-20P-201ENST00000410425 191 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.36□□□□□ -1.87
FOXN1O15353 MTCO3P29-201ENST00000432119 779 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 RPL26P6-201ENST00000440913 438 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 HIGD1AP2-201ENST00000446367 280 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
FOXN1O15353 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
FOXN1O15353 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.36□□□□□ -1.87
FOXN1O15353 RPL30P10-201ENST00000488148 337 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 RNU6-927P-201ENST00000516199 100 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 RNU6-1212P-201ENST00000517023 104 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 RNU6-1315P-201ENST00000517187 99 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 AC093023.1-201ENST00000547375 507 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.36□□□□□ -1.87
FOXN1O15353 AL442163.3-201ENST00000554110 156 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
FOXN1O15353 SNORD84-203ENST00000584275 78 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 AC009318.2-201ENST00000610917 651 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.36□□□□□ -1.87
FOXN1O15353 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 AC132825.6-201ENST00000638861 357 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 LINC02555-201ENST00000563933 1951 ntBASIC3.36□□□□□ -1.87
FOXN1O15353 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXN1O15353 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
FOXN1O15353 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXN1O15353 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXN1O15353 U3.13-201ENST00000364804 214 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 MIR489-201ENST00000384923 84 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 RPL21P75-201ENST00000396599 483 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 RPL21P28-201ENST00000401418 483 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 SNORD56-201ENST00000413522 71 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXN1O15353 AL590556.1-201ENST00000423231 483 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXN1O15353 RPS29P6-201ENST00000438196 145 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 AC009969.1-201ENST00000438726 172 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 HMGN2P23-201ENST00000456759 269 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 RPL21P39-201ENST00000463605 483 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 RPL23AP70-201ENST00000483361 460 ntBASIC3.35□□□□□ -1.87
FOXN1O15353 AC093591.1-201ENST00000491435 481 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms