Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC027449.1-201ENST00000608890 407 ntBASIC1□□□□□ -2.25
UPK2O00526 AC022418.1-201ENST00000624118 445 ntBASIC1□□□□□ -2.25
UPK2O00526 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1□□□□□ -2.25
UPK2O00526 RNA5SP327-201ENST00000362494 101 ntBASIC0.99□□□□□ -2.25
UPK2O00526 RNU6-457P-201ENST00000363999 107 ntBASIC0.99□□□□□ -2.25
UPK2O00526 SNORA26.3-201ENST00000391119 136 ntBASIC0.99□□□□□ -2.25
UPK2O00526 MIR208B-201ENST00000401172 77 ntBASIC0.99□□□□□ -2.25
UPK2O00526 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.99□□□□□ -2.25
UPK2O00526 RPL23AP95-201ENST00000426806 265 ntBASIC0.99□□□□□ -2.25
UPK2O00526 AL133396.1-201ENST00000432048 687 ntBASIC0.99□□□□□ -2.25
UPK2O00526 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.99□□□□□ -2.25
UPK2O00526 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.99□□□□□ -2.25
UPK2O00526 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.99□□□□□ -2.25
UPK2O00526 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.99□□□□□ -2.25
UPK2O00526 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.99□□□□□ -2.25
UPK2O00526 AC007547.1-201ENST00000462177 490 ntBASIC0.99□□□□□ -2.25
UPK2O00526 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.99□□□□□ -2.25
UPK2O00526 RN7SKP179-201ENST00000516126 217 ntBASIC0.99□□□□□ -2.25
UPK2O00526 RNU6-759P-201ENST00000516740 103 ntBASIC0.99□□□□□ -2.25
UPK2O00526 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.99□□□□□ -2.25
UPK2O00526 AC090821.2-201ENST00000523552 176 ntBASIC0.99□□□□□ -2.25
UPK2O00526 AP000889.1-201ENST00000530968 660 ntBASIC0.99□□□□□ -2.25
UPK2O00526 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.99□□□□□ -2.25
UPK2O00526 EIF4A1P12-201ENST00000551910 141 ntBASIC0.99□□□□□ -2.25
UPK2O00526 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.99□□□□□ -2.25
UPK2O00526 MIR3660-201ENST00000584845 100 ntBASIC0.99□□□□□ -2.25
UPK2O00526 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.99□□□□□ -2.25
UPK2O00526 CTHRC1P1-201ENST00000605383 469 ntBASIC0.99□□□□□ -2.25
UPK2O00526 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.99□□□□□ -2.25
UPK2O00526 AC092268.1-201ENST00000342691 405 ntBASIC0.98□□□□□ -2.25
UPK2O00526 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
UPK2O00526 RNU6-545P-201ENST00000362681 104 ntBASIC0.98□□□□□ -2.25
UPK2O00526 RNU6-1019P-201ENST00000364424 107 ntBASIC0.98□□□□□ -2.25
UPK2O00526 RNU6-418P-201ENST00000384035 107 ntBASIC0.98□□□□□ -2.25
UPK2O00526 U8.10-201ENST00000384260 133 ntBASIC0.98□□□□□ -2.25
UPK2O00526 RNU6-1127P-201ENST00000384580 107 ntBASIC0.98□□□□□ -2.25
UPK2O00526 SNORA40.3-201ENST00000390964 122 ntBASIC0.98□□□□□ -2.25
UPK2O00526 RNU4-46P-201ENST00000410818 138 ntBASIC0.98□□□□□ -2.25
UPK2O00526 HMGN1P14-201ENST00000412459 517 ntBASIC0.98□□□□□ -2.25
UPK2O00526 MTND3P17-201ENST00000416968 344 ntBASIC0.98□□□□□ -2.25
UPK2O00526 ARL5AP1-201ENST00000418991 388 ntBASIC0.98□□□□□ -2.25
UPK2O00526 Z99497.1-201ENST00000421282 135 ntBASIC0.98□□□□□ -2.25
UPK2O00526 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.98□□□□□ -2.25
UPK2O00526 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.98□□□□□ -2.25
UPK2O00526 AC079382.1-201ENST00000493346 557 ntBASIC0.98□□□□□ -2.25
UPK2O00526 AC016632.1-201ENST00000503994 196 ntBASIC0.98□□□□□ -2.25
UPK2O00526 AC079140.3-201ENST00000511111 550 ntBASIC0.98□□□□□ -2.25
UPK2O00526 RNU6-1129P-201ENST00000515964 104 ntBASIC0.98□□□□□ -2.25
UPK2O00526 SNORD60.2-201ENST00000516883 86 ntBASIC0.98□□□□□ -2.25
UPK2O00526 CYP3A52P-201ENST00000563326 91 ntBASIC0.98□□□□□ -2.25
UPK2O00526 AGGF1P4-201ENST00000568249 801 ntBASIC0.98□□□□□ -2.25
UPK2O00526 MIR4703-201ENST00000577728 79 ntBASIC0.98□□□□□ -2.25
UPK2O00526 MIR3682-201ENST00000581338 84 ntBASIC0.98□□□□□ -2.25
UPK2O00526 AC090616.2-202ENST00000584248 222 ntBASIC0.98□□□□□ -2.25
UPK2O00526 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
UPK2O00526 AC126177.8-201ENST00000618339 1015 ntBASIC0.98□□□□□ -2.25
UPK2O00526 SNORA43.4-201ENST00000629559 138 ntBASIC0.98□□□□□ -2.25
UPK2O00526 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
UPK2O00526 RNU6-266P-201ENST00000364225 107 ntBASIC0.97□□□□□ -2.25
UPK2O00526 SNORA63D-201ENST00000364359 132 ntBASIC0.97□□□□□ -2.25
UPK2O00526 SNORA4.2-201ENST00000365313 147 ntBASIC0.97□□□□□ -2.25
UPK2O00526 RNU6-282P-201ENST00000365357 103 ntBASIC0.97□□□□□ -2.25
UPK2O00526 RNU6-434P-201ENST00000384376 107 ntBASIC0.97□□□□□ -2.25
UPK2O00526 AL117342.1-201ENST00000404861 406 ntBASIC0.97□□□□□ -2.25
UPK2O00526 AL161935.2-201ENST00000414627 60 ntBASIC0.97□□□□□ -2.25
UPK2O00526 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.97□□□□□ -2.25
UPK2O00526 AL591806.2-201ENST00000433122 173 ntBASIC0.97□□□□□ -2.25
UPK2O00526 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
UPK2O00526 AC007395.1-201ENST00000451333 677 ntBASIC0.97□□□□□ -2.25
UPK2O00526 SCARNA18-201ENST00000459004 134 ntBASIC0.97□□□□□ -2.25
UPK2O00526 RN7SKP210-201ENST00000459176 261 ntBASIC0.97□□□□□ -2.25
UPK2O00526 RPL30P7-201ENST00000479312 323 ntBASIC0.97□□□□□ -2.25
UPK2O00526 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.97□□□□□ -2.25
UPK2O00526 RPS23P5-201ENST00000495419 428 ntBASIC0.97□□□□□ -2.25
UPK2O00526 AC106038.2-201ENST00000520706 568 ntBASIC0.97□□□□□ -2.25
UPK2O00526 CYP4A27P-201ENST00000567218 190 ntBASIC0.97□□□□□ -2.25
UPK2O00526 AC015688.6-201ENST00000577737 104 ntBASIC0.97□□□□□ -2.25
UPK2O00526 MIR4421-201ENST00000578133 69 ntBASIC0.97□□□□□ -2.25
UPK2O00526 RSL24D1P11-201ENST00000591045 491 ntBASIC0.97□□□□□ -2.25
UPK2O00526 AC073413.2-201ENST00000604332 360 ntBASIC0.97□□□□□ -2.25
UPK2O00526 AL512598.1-201ENST00000610158 273 ntBASIC0.97□□□□□ -2.25
UPK2O00526 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
UPK2O00526 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
UPK2O00526 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
UPK2O00526 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
UPK2O00526 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
UPK2O00526 RNU1-76P-201ENST00000362903 159 ntBASIC0.96□□□□□ -2.26
UPK2O00526 Y_RNA.132-201ENST00000363421 102 ntBASIC0.96□□□□□ -2.26
UPK2O00526 RNU6-108P-201ENST00000365558 107 ntBASIC0.96□□□□□ -2.26
UPK2O00526 SNORA18.2-201ENST00000383865 132 ntBASIC0.96□□□□□ -2.26
UPK2O00526 Y_RNA.480-201ENST00000384364 102 ntBASIC0.96□□□□□ -2.26
UPK2O00526 RNA5SP213-201ENST00000391031 106 ntBASIC0.96□□□□□ -2.26
UPK2O00526 AC060773.1-201ENST00000421698 310 ntBASIC0.96□□□□□ -2.26
UPK2O00526 MTCO2P34-201ENST00000421994 607 ntBASIC0.96□□□□□ -2.26
UPK2O00526 FTH1P12-201ENST00000432137 551 ntBASIC0.96□□□□□ -2.26
UPK2O00526 USP9YP28-201ENST00000435142 589 ntBASIC0.96□□□□□ -2.26
UPK2O00526 AC073910.1-201ENST00000445047 438 ntBASIC0.96□□□□□ -2.26
UPK2O00526 RPL31P58-201ENST00000469001 379 ntBASIC0.96□□□□□ -2.26
UPK2O00526 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.96□□□□□ -2.26
UPK2O00526 RPL39P5-202ENST00000512505 151 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms