Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
FOXN3O00409 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
FOXN3O00409 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXN3O00409 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3□□□□□ -1.93
FOXN3O00409 AC010329.5-201ENST00000623497 2174 ntBASIC3□□□□□ -1.93
FOXN3O00409 MTND5P16-201ENST00000460269 1703 ntBASIC3□□□□□ -1.93
FOXN3O00409 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3□□□□□ -1.93
FOXN3O00409 SNORD50.1-201ENST00000362987 71 ntBASIC3□□□□□ -1.93
FOXN3O00409 Y_RNA.144-201ENST00000363521 113 ntBASIC3□□□□□ -1.93
FOXN3O00409 RNU6-1210P-201ENST00000363775 107 ntBASIC3□□□□□ -1.93
FOXN3O00409 Y_RNA.364-201ENST00000365532 101 ntBASIC3□□□□□ -1.93
FOXN3O00409 SNORA18.3-201ENST00000384122 132 ntBASIC3□□□□□ -1.93
FOXN3O00409 RNY1P14-201ENST00000384426 108 ntBASIC3□□□□□ -1.93
FOXN3O00409 UBA52P6-201ENST00000399822 382 ntBASIC3□□□□□ -1.93
FOXN3O00409 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3□□□□□ -1.93
FOXN3O00409 AC096664.2-201ENST00000411843 406 ntBASIC3□□□□□ -1.93
FOXN3O00409 MRPS18CP6-201ENST00000423587 223 ntBASIC3□□□□□ -1.93
FOXN3O00409 RPL23AP95-201ENST00000426806 265 ntBASIC3□□□□□ -1.93
FOXN3O00409 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3□□□□□ -1.93
FOXN3O00409 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3□□□□□ -1.93
FOXN3O00409 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3□□□□□ -1.93
FOXN3O00409 AC090515.1-201ENST00000465295 476 ntBASIC3□□□□□ -1.93
FOXN3O00409 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3□□□□□ -1.93
FOXN3O00409 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3□□□□□ -1.93
FOXN3O00409 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3□□□□□ -1.93
FOXN3O00409 RNU6-470P-201ENST00000515954 104 ntBASIC3□□□□□ -1.93
FOXN3O00409 CBX3P8-201ENST00000532412 525 ntBASIC3□□□□□ -1.93
FOXN3O00409 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3□□□□□ -1.93
FOXN3O00409 AC069294.1-201ENST00000608397 350 ntBASIC3□□□□□ -1.93
FOXN3O00409 AL159153.1-201ENST00000619688 317 ntBASIC3□□□□□ -1.93
FOXN3O00409 SNORA43.4-201ENST00000629559 138 ntBASIC3□□□□□ -1.93
FOXN3O00409 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3□□□□□ -1.93
FOXN3O00409 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
FOXN3O00409 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3□□□□□ -1.93
FOXN3O00409 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
FOXN3O00409 RNU6-1285P-201ENST00000363480 105 ntBASIC2.99□□□□□ -1.93
FOXN3O00409 MRPL42P3-201ENST00000401492 326 ntBASIC2.99□□□□□ -1.93
FOXN3O00409 AL591034.2-201ENST00000402839 359 ntBASIC2.99□□□□□ -1.93
FOXN3O00409 EIF1AXP1-201ENST00000419267 435 ntBASIC2.99□□□□□ -1.93
FOXN3O00409 EIF4EP2-201ENST00000422816 654 ntBASIC2.99□□□□□ -1.93
FOXN3O00409 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.99□□□□□ -1.93
FOXN3O00409 snoU13.6-201ENST00000458785 104 ntBASIC2.99□□□□□ -1.93
FOXN3O00409 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.99□□□□□ -1.93
FOXN3O00409 AC109329.1-201ENST00000518744 317 ntBASIC2.99□□□□□ -1.93
FOXN3O00409 AC022080.3-201ENST00000544433 482 ntBASIC2.99□□□□□ -1.93
FOXN3O00409 ZNF861P-201ENST00000588126 639 ntBASIC2.99□□□□□ -1.93
FOXN3O00409 AL158827.2-201ENST00000602494 330 ntBASIC2.99□□□□□ -1.93
FOXN3O00409 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.99□□□□□ -1.93
FOXN3O00409 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.99□□□□□ -1.93
FOXN3O00409 AL691447.3-201ENST00000635020 330 ntBASIC2.99□□□□□ -1.93
FOXN3O00409 AL161431.1-201ENST00000618966 4205 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 AC092268.1-201ENST00000342691 405 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 Y_RNA.80-201ENST00000362996 102 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 RNU4-56P-201ENST00000364700 142 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 RNU6-784P-201ENST00000384330 106 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 Y_RNA.485-201ENST00000384395 102 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 SNORA44-201ENST00000384584 132 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 SNORA48.2-201ENST00000390926 124 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 NDUFB4P4-201ENST00000404822 243 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 RN7SKP61-201ENST00000410642 295 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 AC018865.2-201ENST00000423631 129 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.98□□□□□ -1.93
FOXN3O00409 MTND5P22-201ENST00000458380 195 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.98□□□□□ -1.93
FOXN3O00409 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.98□□□□□ -1.93
FOXN3O00409 RPL30P1-201ENST00000488676 339 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 AC105758.1-201ENST00000506038 399 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.98□□□□□ -1.93
FOXN3O00409 AC027176.1-201ENST00000560204 514 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 MIR3605-201ENST00000583214 100 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 AC005899.2-201ENST00000584353 90 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 AC023043.3-201ENST00000593113 385 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 AL034555.1-201ENST00000604816 211 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 AL121655.1-201ENST00000605811 308 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 AC009318.2-201ENST00000610917 651 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.98□□□□□ -1.93
FOXN3O00409 MAPK10-266ENST00000641066 6555 ntBASIC2.98□□□□□ -1.93
FOXN3O00409 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
FOXN3O00409 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.97□□□□□ -1.93
FOXN3O00409 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.97□□□□□ -1.93
FOXN3O00409 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
FOXN3O00409 RNY3P11-201ENST00000364153 102 ntBASIC2.97□□□□□ -1.93
FOXN3O00409 RNU6-450P-201ENST00000364654 107 ntBASIC2.97□□□□□ -1.93
FOXN3O00409 SNORA29-201ENST00000384183 140 ntBASIC2.97□□□□□ -1.93
FOXN3O00409 RNU6-1105P-201ENST00000384774 107 ntBASIC2.97□□□□□ -1.93
FOXN3O00409 SNORD88.1-201ENST00000408684 91 ntBASIC2.97□□□□□ -1.93
FOXN3O00409 RNA5SP494-201ENST00000410653 129 ntBASIC2.97□□□□□ -1.93
FOXN3O00409 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.97□□□□□ -1.93
FOXN3O00409 MTCYBP10-201ENST00000424905 650 ntBASIC2.97□□□□□ -1.93
FOXN3O00409 AIMP1P2-201ENST00000425294 312 ntBASIC2.97□□□□□ -1.93
FOXN3O00409 AC078809.1-201ENST00000427601 140 ntBASIC2.97□□□□□ -1.93
FOXN3O00409 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.97□□□□□ -1.93
FOXN3O00409 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.97□□□□□ -1.93
FOXN3O00409 AC079354.2-201ENST00000453523 154 ntBASIC2.97□□□□□ -1.93
FOXN3O00409 AL353752.1-201ENST00000454946 260 ntBASIC2.97□□□□□ -1.93
FOXN3O00409 HMGB1P35-201ENST00000503360 598 ntBASIC2.97□□□□□ -1.93
FOXN3O00409 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.97□□□□□ -1.93
FOXN3O00409 RNU6-307P-201ENST00000516743 106 ntBASIC2.97□□□□□ -1.93
FOXN3O00409 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.97□□□□□ -1.93
FOXN3O00409 AP000889.1-201ENST00000530968 660 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms