Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 RNU6-793P-201ENST00000384233 104 ntBASIC-0.41□□□□□ -2.48
COL6A5A8TX70 TAF9BP2-201ENST00000400856 499 ntBASIC-0.41□□□□□ -2.48
COL6A5A8TX70 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
COL6A5A8TX70 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC-0.41□□□□□ -2.48
COL6A5A8TX70 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.41□□□□□ -2.48
COL6A5A8TX70 RNU7-165P-201ENST00000458864 60 ntBASIC-0.41□□□□□ -2.48
COL6A5A8TX70 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-0.41□□□□□ -2.48
COL6A5A8TX70 AC117525.1-201ENST00000515228 503 ntBASIC-0.41□□□□□ -2.48
COL6A5A8TX70 SNORD79.1-201ENST00000516069 84 ntBASIC-0.41□□□□□ -2.48
COL6A5A8TX70 AC009268.1-201ENST00000561352 1203 ntBASIC-0.41□□□□□ -2.48
COL6A5A8TX70 AL357094.1-201ENST00000603845 844 ntBASIC-0.41□□□□□ -2.48
COL6A5A8TX70 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.41□□□□□ -2.48
COL6A5A8TX70 AC055876.5-201ENST00000605667 259 ntBASIC-0.41□□□□□ -2.48
COL6A5A8TX70 AC144521.1-201ENST00000607148 956 ntBASIC-0.41□□□□□ -2.48
COL6A5A8TX70 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.41□□□□□ -2.48
COL6A5A8TX70 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.41□□□□□ -2.48
COL6A5A8TX70 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AF228730.1-201ENST00000397972 663 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AL049734.2-201ENST00000441066 616 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 RPL7P55-201ENST00000450522 746 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AC106038.2-201ENST00000520706 568 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AL137246.1-201ENST00000607072 977 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AF129408.1-201ENST00000608767 431 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AL590396.4-201ENST00000636779 956 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 DEFB130D-201ENST00000426866 237 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AC093422.3-201ENST00000428506 305 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AC024082.2-201ENST00000434771 238 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 MTND1P17-201ENST00000448961 204 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.42□□□□□ -2.48
COL6A5A8TX70 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.42□□□□□ -2.48
COL6A5A8TX70 RPS26P48-201ENST00000491713 339 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AC026421.1-201ENST00000519101 163 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.42□□□□□ -2.48
COL6A5A8TX70 MIR4770-201ENST00000579149 58 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 MIR3129-201ENST00000581095 76 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 MIR3666-201ENST00000607845 111 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 uc_338.19-201ENST00000616808 99 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AC024940.5-201ENST00000622889 474 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 AL157786.1-207ENST00000627771 695 ntBASIC-0.42□□□□□ -2.48
COL6A5A8TX70 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 RNU6-815P-201ENST00000384080 113 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 RNU6-217P-201ENST00000384164 104 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 RNU4-30P-201ENST00000410245 143 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 RNU6-233P-201ENST00000410845 141 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 RAB28P5-201ENST00000427490 651 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 MTND4P15-201ENST00000437913 1033 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
COL6A5A8TX70 RNU7-56P-201ENST00000458744 62 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.43□□□□□ -2.48
COL6A5A8TX70 TRAV32-201ENST00000553993 340 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC-0.43□□□□□ -2.48
COL6A5A8TX70 AL713998.2-201ENST00000604538 1198 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 AL583856.2-201ENST00000606298 543 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 AP005229.2-201ENST00000609980 697 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 SNORA36A-201ENST00000384221 132 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 MT-TC-201ENST00000387405 66 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 RNU6-796P-201ENST00000391086 107 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 MTATP6P31-201ENST00000406985 692 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC-0.43□□□□□ -2.48
COL6A5A8TX70 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.43□□□□□ -2.48
COL6A5A8TX70 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.43□□□□□ -2.48
COL6A5A8TX70 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.43□□□□□ -2.48
COL6A5A8TX70 AC099677.2-201ENST00000436385 175 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.43□□□□□ -2.48
COL6A5A8TX70 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.43□□□□□ -2.48
COL6A5A8TX70 MIR4743-201ENST00000584576 69 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 AC010615.3-201ENST00000597319 394 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 AC091057.3-201ENST00000602684 733 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 AC091152.3-201ENST00000604227 325 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 MTND4P4-201ENST00000439033 1366 ntBASIC-0.43□□□□□ -2.48
COL6A5A8TX70 RNU6-969P-201ENST00000383900 105 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.44□□□□□ -2.48
COL6A5A8TX70 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.44□□□□□ -2.48
COL6A5A8TX70 AC087499.4-201ENST00000448505 178 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 AC104689.1-201ENST00000473356 768 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 RNU6-803P-201ENST00000516034 102 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 AC109329.1-201ENST00000518744 317 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 AL049870.4-201ENST00000555741 486 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 AC005951.2-201ENST00000576282 495 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 AC005592.1-201ENST00000566527 1640 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 BX322639.1-202ENST00000423987 2213 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 RNU6-1243P-201ENST00000364028 107 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 RNU6-163P-201ENST00000384396 106 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 RNU6-950P-201ENST00000384651 107 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 AL136310.1-201ENST00000404926 654 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 MTND1P20-201ENST00000430341 950 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 PTGES3P1-201ENST00000439531 483 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 AL162395.1-201ENST00000457882 422 ntBASIC-0.44□□□□□ -2.48
COL6A5A8TX70 AC090572.1-201ENST00000519251 160 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms