Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 SNORD73A-201ENST00000386062 65 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 AL354751.2-201ENST00000415471 210 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2□□□□□ -2.09
SRRM4A7MD48 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2□□□□□ -2.09
SRRM4A7MD48 AC107399.1-201ENST00000451226 265 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2□□□□□ -2.09
SRRM4A7MD48 Y_RNA.635-201ENST00000459041 101 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 SNORD19B-201ENST00000459623 84 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 SNRPGP7-201ENST00000469016 106 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 AC104564.1-201ENST00000493028 407 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 AC096745.1-201ENST00000509945 370 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2□□□□□ -2.09
SRRM4A7MD48 RN7SKP24-201ENST00000515888 284 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 RNU6-559P-201ENST00000516151 98 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 RNU6-1332P-201ENST00000516666 104 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 RNA5SP402-201ENST00000517148 110 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 RNA5SP454-201ENST00000517231 127 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 AC034114.1-201ENST00000520293 285 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 AC022616.8-201ENST00000533569 253 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 NDUFA5P6-201ENST00000542110 379 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 FRG2DP-202ENST00000566967 323 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 LARP7P3-201ENST00000579888 337 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 MIR5194-201ENST00000582634 120 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 SNRPGP17-201ENST00000603780 214 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 ELOCP5-201ENST00000604924 333 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 RPL17P51-201ENST00000605218 238 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 AL138726.1-201ENST00000614873 333 ntBASIC2□□□□□ -2.09
SRRM4A7MD48 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
SRRM4A7MD48 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SRRM4A7MD48 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SRRM4A7MD48 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SRRM4A7MD48 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.99□□□□□ -2.09
SRRM4A7MD48 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SRRM4A7MD48 snoU2_19.1-201ENST00000362361 80 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 Y_RNA.135-201ENST00000363439 95 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 Y_RNA.259-201ENST00000364619 101 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 U8.8-201ENST00000365399 135 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 SNORD116-11-201ENST00000383882 92 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 RNU6-1297P-201ENST00000384415 104 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 RNU1-148P-201ENST00000384472 162 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 SNORD116-29-201ENST00000384516 83 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 RNU6-1274P-201ENST00000384557 107 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 MIR27B-201ENST00000385129 97 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 MIR1294-201ENST00000408503 142 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 RNU2-32P-201ENST00000411193 191 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 RNU6-1304P-201ENST00000411374 106 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 AC074085.1-201ENST00000413598 418 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.99□□□□□ -2.09
SRRM4A7MD48 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.99□□□□□ -2.09
SRRM4A7MD48 AL139396.1-201ENST00000421137 167 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 AC063976.3-201ENST00000426849 329 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.99□□□□□ -2.09
SRRM4A7MD48 AC236972.2-201ENST00000434979 310 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.99□□□□□ -2.09
SRRM4A7MD48 GPM6BP3-201ENST00000442797 145 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.99□□□□□ -2.09
SRRM4A7MD48 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.99□□□□□ -2.09
SRRM4A7MD48 MTND1P17-201ENST00000448961 204 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.99□□□□□ -2.09
SRRM4A7MD48 AL353752.1-201ENST00000454946 260 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.99□□□□□ -2.09
SRRM4A7MD48 MTND5P5-201ENST00000503764 376 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 RPL39P5-202ENST00000512505 151 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.99□□□□□ -2.09
SRRM4A7MD48 RNA5SP320-201ENST00000516263 124 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 RNA5SP137-201ENST00000516833 135 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.99□□□□□ -2.09
SRRM4A7MD48 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.99□□□□□ -2.09
SRRM4A7MD48 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.99□□□□□ -2.09
SRRM4A7MD48 TRAV32-201ENST00000553993 340 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 MIR7106-201ENST00000612419 65 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 AC245884.12-201ENST00000615364 59 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 MTND4LP32-201ENST00000636111 270 ntBASIC1.99□□□□□ -2.09
SRRM4A7MD48 AC009541.1-201ENST00000438279 2662 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 RNU6-562P-201ENST00000362731 107 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 RNA5SP393-201ENST00000363423 117 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SRRM4A7MD48 Y_RNA.431-201ENST00000384086 102 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 RNU6-1032P-201ENST00000384100 107 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 MIR634-201ENST00000385208 97 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SRRM4A7MD48 RNU6-370P-201ENST00000411008 104 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 RNA5SP270-201ENST00000411361 118 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 AL030996.1-201ENST00000411430 235 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 RPL37P10-201ENST00000412884 288 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 AF228730.4-201ENST00000421457 183 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 AL590632.1-201ENST00000424289 371 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.98□□□□□ -2.09
SRRM4A7MD48 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.98□□□□□ -2.09
SRRM4A7MD48 AL031659.1-201ENST00000447075 539 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.98□□□□□ -2.09
SRRM4A7MD48 AC092436.3-201ENST00000511788 257 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.98□□□□□ -2.09
SRRM4A7MD48 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.98□□□□□ -2.09
SRRM4A7MD48 AC104576.1-201ENST00000524225 88 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.98□□□□□ -2.09
SRRM4A7MD48 CYP4A27P-201ENST00000567218 190 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 MIR4319-201ENST00000577285 85 ntBASIC1.98□□□□□ -2.09
SRRM4A7MD48 AP000654.2-201ENST00000605633 586 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms