Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 Y_RNA.490-201ENST00000384413 102 ntBASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 RNU6-95P-201ENST00000384697 107 ntBASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 MIR95-201ENST00000385072 81 ntBASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 MTND3P8-201ENST00000412909 339 ntBASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 NDUFA5P4-201ENST00000436704 385 ntBASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 NDUFB1P2-201ENST00000449477 176 ntBASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 UBL5P3-201ENST00000475112 231 ntBASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 MED28P2-201ENST00000475771 317 ntBASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 SNORA48.11-201ENST00000517015 89 ntBASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 RNU6-1213P-201ENST00000517075 94 ntBASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 RAB11AP2-201ENST00000545905 639 ntBASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 AC093913.1-201ENST00000614178 329 ntBASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 MIR7843-201ENST00000622274 79 ntBASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TRIM49BA6NDI0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 Y_RNA.72-201ENST00000362894 103 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 RNU1-72P-201ENST00000362976 153 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 Y_RNA.135-201ENST00000363439 95 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 Y_RNA.151-201ENST00000363566 112 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 RNU6-336P-201ENST00000364891 107 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 Y_RNA.530-201ENST00000384587 101 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 AL117339.3-201ENST00000418733 162 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 MTCO2P3-201ENST00000442543 421 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 AC107032.1-201ENST00000485945 480 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 HMGB1P30-201ENST00000492455 606 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 AC091874.1-201ENST00000511402 339 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 SNORA31.25-201ENST00000517242 134 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 AC105029.1-201ENST00000520250 669 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 MIR3935-201ENST00000583472 104 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 UBE2V2P2-201ENST00000587677 504 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 AL158827.2-201ENST00000602494 330 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 AL713866.2-201ENST00000603579 219 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 RMST_7.1-201ENST00000621935 268 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 AL691447.3-201ENST00000635020 330 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 TPTEP1-208ENST00000636884 213 ntBASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRIM49BA6NDI0 MTND4P12-201ENST00000498999 1377 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 Y_RNA.474-201ENST00000384341 102 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 RNU1-57P-201ENST00000384491 166 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 RNU6-692P-201ENST00000384496 107 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 MIR504-201ENST00000385065 83 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 AL079342.1-201ENST00000401460 267 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 HMGB1P18-201ENST00000438801 619 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 RNU7-138P-201ENST00000459479 64 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 RNU6-277P-201ENST00000516272 106 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 SNORA43.2-201ENST00000516652 128 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 RNU2-19P-201ENST00000517288 84 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 AP004607.1-201ENST00000524456 203 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 TRAV32-201ENST00000553993 340 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 POLR3GP2-201ENST00000588366 668 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 AC073410.2-201ENST00000603240 332 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 LARP7P1-201ENST00000605576 316 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 AC099654.5-201ENST00000636479 350 ntBASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM49BA6NDI0 HAUS6P2-201ENST00000433254 2404 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 SNORD113-7-201ENST00000363762 77 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 Y_RNA.356-201ENST00000365475 113 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 RNU6-1329P-201ENST00000365664 107 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 SNORD116-20-201ENST00000384529 92 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 AC009161.1-201ENST00000417306 376 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 EIF1AXP1-201ENST00000419267 435 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 AIMP1P2-201ENST00000425294 312 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 GPM6BP3-201ENST00000442797 145 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 MTND3P10-201ENST00000450967 341 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 AC055731.1-201ENST00000474387 401 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 RNA5SP137-201ENST00000516833 135 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 RNA5SP364-201ENST00000516938 78 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 RN7SKP256-201ENST00000517201 314 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 RNA5SP454-201ENST00000517231 127 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 AC109329.1-201ENST00000518744 317 ntBASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.11□□□□□ -2.07
TRIM49BA6NDI0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms