Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL449363.1-201ENST00000617815 186 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 AC097372.5-201ENST00000623665 376 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 CTSLP2-204ENST00000629029 392 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 AC241585.2-209ENST00000638217 143 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 AC010889.1-201ENST00000566193 2666 ntBASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 RNU6-692P-201ENST00000384496 107 ntBASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 AC243428.1-201ENST00000421099 264 ntBASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 AC006026.2-201ENST00000457376 180 ntBASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 MED28P2-201ENST00000475771 317 ntBASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 SNORA31.11-201ENST00000516528 139 ntBASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 SNORD19.2-201ENST00000516978 73 ntBASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 AC020661.2-201ENST00000560114 134 ntBASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 AC080078.3-201ENST00000605407 463 ntBASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 MIR8076-201ENST00000611401 83 ntBASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.62□□□□□ -1.99
SNX9Q9Y5X1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 MIR369-201ENST00000362155 70 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 SNORD50.1-201ENST00000362987 71 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 Y_RNA.132-201ENST00000363421 102 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 Y_RNA.197-201ENST00000364004 102 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 RNU6-890P-201ENST00000384121 107 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 RNU6-622P-201ENST00000384272 103 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 RNU6-790P-201ENST00000384479 105 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 SNORA67.4-201ENST00000384688 142 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 RNU6-1106P-201ENST00000390845 107 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 SNORA75.6-201ENST00000391318 127 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 MTCO2P12-201ENST00000427426 682 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 AC005534.2-201ENST00000431047 433 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 AC133134.1-201ENST00000466800 359 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 RNU6-120P-201ENST00000516077 103 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 RNA5SP402-201ENST00000517148 110 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 AL391813.1-201ENST00000603098 260 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 AP001836.1-201ENST00000604675 523 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SNX9Q9Y5X1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 MTND5P30-201ENST00000452896 1731 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 AC069528.2-201ENST00000624849 1991 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 Y_RNA.5-201ENST00000362334 102 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 SNORD56.1-201ENST00000362913 68 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 RNU6-527P-201ENST00000363425 104 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 Y_RNA.146-201ENST00000363549 102 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 SNORD32A-201ENST00000364805 84 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 MIR559-201ENST00000385188 96 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 AP000275.1-201ENST00000411943 390 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 BX276092.3-201ENST00000424182 230 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 USMG5P1-201ENST00000425964 177 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 Z82205.1-201ENST00000428456 297 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 AC079354.2-201ENST00000453523 154 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 FO393415.2-201ENST00000480085 343 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 RNU6-1170P-201ENST00000515974 106 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 SCARNA16.2-201ENST00000516520 172 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 RNU5B-3P-201ENST00000516601 115 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 AC109446.1-201ENST00000566172 220 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 MIR5696-201ENST00000578474 85 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 AL158827.2-201ENST00000602494 330 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 SNRPGP17-201ENST00000603780 214 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 AC018889.1-201ENST00000605372 397 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 PISRT1.1-201ENST00000616930 107 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 AC007742.2-201ENST00000618226 398 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 uc_338.22-201ENST00000622722 187 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 AC134503.1-201ENST00000633048 54 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 AL691447.3-201ENST00000635020 330 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms