Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 SNORA40-201ENST00000388090 126 ntBASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 RNU6-763P-201ENST00000390865 106 ntBASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 RNU6-1248P-201ENST00000391096 64 ntBASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 RNU2-54P-201ENST00000410299 190 ntBASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 RN7SKP53-201ENST00000411337 315 ntBASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 AL035461.1-201ENST00000421490 332 ntBASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 RPL21P66-201ENST00000426566 466 ntBASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 RPS29P20-201ENST00000489592 171 ntBASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 SNORA31.16-201ENST00000516773 139 ntBASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 RNU1-30P-201ENST00000606575 163 ntBASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 MIR486-1-201ENST00000612171 68 ntBASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SNX11Q9Y5W9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 AC092268.1-201ENST00000342691 405 ntBASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 RNU5F-3P-201ENST00000363767 117 ntBASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 Y_RNA.218-201ENST00000364218 104 ntBASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 RNU6-275P-201ENST00000364910 107 ntBASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 RNU4-11P-201ENST00000365287 132 ntBASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 AC009963.1-201ENST00000417265 157 ntBASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 AC019205.3-201ENST00000424573 156 ntBASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 RNU6-1211P-201ENST00000459179 105 ntBASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 RNU6-1333P-201ENST00000516162 93 ntBASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 MIR2114-201ENST00000516645 80 ntBASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 RNU6-1282P-201ENST00000516735 96 ntBASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 RNU6-1234P-201ENST00000516877 103 ntBASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 MIR3674-201ENST00000636576 68 ntBASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 LINC02471-203ENST00000641941 4752 ntBASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SNX11Q9Y5W9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
SNX11Q9Y5W9 Y_RNA.71-201ENST00000362892 104 ntBASIC3.71□□□□□ -1.82
SNX11Q9Y5W9 RNU4-10P-201ENST00000364383 140 ntBASIC3.71□□□□□ -1.82
SNX11Q9Y5W9 MTND4LP9-201ENST00000427694 174 ntBASIC3.71□□□□□ -1.82
SNX11Q9Y5W9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.71□□□□□ -1.82
SNX11Q9Y5W9 HMGN2P21-201ENST00000447764 270 ntBASIC3.71□□□□□ -1.82
SNX11Q9Y5W9 AL137159.1-201ENST00000452808 512 ntBASIC3.71□□□□□ -1.82
SNX11Q9Y5W9 RPL30P5-201ENST00000494923 336 ntBASIC3.71□□□□□ -1.82
SNX11Q9Y5W9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX11Q9Y5W9 AC021269.2-201ENST00000532318 330 ntBASIC3.71□□□□□ -1.82
SNX11Q9Y5W9 AC009127.3-201ENST00000570531 403 ntBASIC3.71□□□□□ -1.82
SNX11Q9Y5W9 AC009163.5-201ENST00000575421 637 ntBASIC3.71□□□□□ -1.82
SNX11Q9Y5W9 MIR5195-201ENST00000583555 115 ntBASIC3.71□□□□□ -1.82
SNX11Q9Y5W9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SNX11Q9Y5W9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SNX11Q9Y5W9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SNX11Q9Y5W9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 MFSD8-236ENST00000641509 4050 ntBASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 RNU6-799P-201ENST00000363567 107 ntBASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 ATP5A1P2-201ENST00000412323 255 ntBASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 AC090525.1-201ENST00000479116 478 ntBASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 RNU6-107P-201ENST00000516643 102 ntBASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 SCARNA13-201ENST00000516672 275 ntBASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 AC022616.8-201ENST00000533569 253 ntBASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 AC006380.1-201ENST00000603598 186 ntBASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 MIR3658-201ENST00000636291 56 ntBASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 MIR3529-201ENST00000637713 78 ntBASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 AL133383.2-201ENST00000622958 2336 ntBASIC3.7□□□□□ -1.82
SNX11Q9Y5W9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNX11Q9Y5W9 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SNX11Q9Y5W9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SNX11Q9Y5W9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNX11Q9Y5W9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX11Q9Y5W9 AC134026.1-201ENST00000623249 2239 ntBASIC3.69□□□□□ -1.82
SNX11Q9Y5W9 Y_RNA.127-201ENST00000363386 109 ntBASIC3.69□□□□□ -1.82
SNX11Q9Y5W9 Y_RNA.273-201ENST00000364703 102 ntBASIC3.69□□□□□ -1.82
SNX11Q9Y5W9 RNU6-381P-201ENST00000391259 108 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms