Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 RNA5SP367-201ENST00000516557 118 ntBASIC2.61□□□□□ -1.99
CLDN16Q9Y5I7 SNORA31.16-201ENST00000516773 139 ntBASIC2.61□□□□□ -1.99
CLDN16Q9Y5I7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN16Q9Y5I7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN16Q9Y5I7 MIR3136-201ENST00000583498 78 ntBASIC2.61□□□□□ -1.99
CLDN16Q9Y5I7 AC060766.3-201ENST00000591442 263 ntBASIC2.61□□□□□ -1.99
CLDN16Q9Y5I7 AL158827.2-201ENST00000602494 330 ntBASIC2.61□□□□□ -1.99
CLDN16Q9Y5I7 AC069294.1-201ENST00000608397 350 ntBASIC2.61□□□□□ -1.99
CLDN16Q9Y5I7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.61□□□□□ -1.99
CLDN16Q9Y5I7 AL160413.1-201ENST00000622780 310 ntBASIC2.61□□□□□ -1.99
CLDN16Q9Y5I7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CLDN16Q9Y5I7 AC090517.3-201ENST00000625170 141 ntBASIC2.61□□□□□ -1.99
CLDN16Q9Y5I7 AL691447.3-201ENST00000635020 330 ntBASIC2.61□□□□□ -1.99
CLDN16Q9Y5I7 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN16Q9Y5I7 AP000560.1-201ENST00000624150 1937 ntBASIC2.61□□□□□ -1.99
CLDN16Q9Y5I7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 snoU2_19.1-201ENST00000362361 80 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 RNY1P16-201ENST00000363063 111 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 RNU6-525P-201ENST00000363685 104 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 SNORA29-201ENST00000384183 140 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 SNORA36A-201ENST00000384221 132 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 RNA5SP494-201ENST00000410653 129 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 RPL39P40-201ENST00000445481 146 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 AC079354.2-201ENST00000453523 154 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 MIR2053-201ENST00000459295 91 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 AC068781.1-201ENST00000488231 618 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 CKS1BP2-201ENST00000497342 240 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 AC022447.4-201ENST00000504053 364 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 AC021146.2-201ENST00000504736 556 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 AC022493.2-201ENST00000506122 481 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 AC022140.2-201ENST00000623500 188 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 SNORA43.4-201ENST00000629559 138 ntBASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CLDN16Q9Y5I7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 AL138827.1-201ENST00000402666 306 ntBASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 AL590556.1-201ENST00000423231 483 ntBASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 AIMP1P2-201ENST00000425294 312 ntBASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 MICF-203ENST00000432679 129 ntBASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 AC087499.2-201ENST00000432861 149 ntBASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 AC112220.1-201ENST00000434628 355 ntBASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 AC011816.1-201ENST00000441346 546 ntBASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 snoU13.14-201ENST00000459372 104 ntBASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 HMGB1P35-201ENST00000503360 598 ntBASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 RNU6-470P-201ENST00000515954 104 ntBASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 RNU6-567P-201ENST00000516746 107 ntBASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 GTF3AP2-201ENST00000557014 266 ntBASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 MIR5696-201ENST00000578474 85 ntBASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 AC105245.1-201ENST00000581934 244 ntBASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 AL034555.1-201ENST00000604816 211 ntBASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 AC090971.5-201ENST00000621102 293 ntBASIC2.59□□□□□ -1.99
CLDN16Q9Y5I7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CLDN16Q9Y5I7 RNU6-1159P-201ENST00000362933 107 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 SNORA41-201ENST00000384675 132 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 RNU6-700P-201ENST00000391043 107 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 CBX3P9-201ENST00000402326 552 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 AL590004.2-201ENST00000404787 371 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 U6atac.2-201ENST00000408644 118 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 RNA5SP21-201ENST00000410917 96 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 AF228730.4-201ENST00000421457 183 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.58□□□□□ -2
CLDN16Q9Y5I7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.58□□□□□ -2
CLDN16Q9Y5I7 AC090096.1-201ENST00000489168 390 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 RPL23AP75-201ENST00000491601 451 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 RNU6-120P-201ENST00000516077 103 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 AL590705.4-201ENST00000532209 134 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 AC016256.1-201ENST00000547971 354 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 AC093249.1-201ENST00000567049 203 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 MIR3923-201ENST00000579521 83 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 ELOCP29-201ENST00000588193 334 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 AC005014.2-201ENST00000607795 599 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 AC108206.1-201ENST00000570186 4159 ntBASIC2.58□□□□□ -2
CLDN16Q9Y5I7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.58□□□□□ -2
CLDN16Q9Y5I7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.57□□□□□ -2
CLDN16Q9Y5I7 RNU6-595P-201ENST00000363944 107 ntBASIC2.57□□□□□ -2
CLDN16Q9Y5I7 Y_RNA.813-201ENST00000364639 102 ntBASIC2.57□□□□□ -2
CLDN16Q9Y5I7 RNU4-9P-201ENST00000364951 139 ntBASIC2.57□□□□□ -2
CLDN16Q9Y5I7 MIR524-201ENST00000385242 87 ntBASIC2.57□□□□□ -2
CLDN16Q9Y5I7 AL139095.1-201ENST00000404326 391 ntBASIC2.57□□□□□ -2
CLDN16Q9Y5I7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.57□□□□□ -2
CLDN16Q9Y5I7 AC012306.1-201ENST00000423267 114 ntBASIC2.57□□□□□ -2
CLDN16Q9Y5I7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.57□□□□□ -2
CLDN16Q9Y5I7 EEF1B2P7-201ENST00000451177 676 ntBASIC2.57□□□□□ -2
CLDN16Q9Y5I7 AC108938.1-201ENST00000451204 136 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms