Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SNORA43.4-201ENST00000629559 138 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 AC243829.7-201ENST00000633081 225 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 AL137790.1-201ENST00000634283 177 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 AC110774.1-201ENST00000623567 2018 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 AL109809.4-201ENST00000603520 2185 ntBASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDHB1Q9Y5F3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 AC099654.7-201ENST00000635788 2127 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 MTND5P27-201ENST00000428871 1720 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 RNU6-1159P-201ENST00000362933 107 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 RNU5B-2P-201ENST00000363036 113 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 Y_RNA.176-201ENST00000363815 109 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 RNU4-56P-201ENST00000364700 142 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 RNU6-1318P-201ENST00000365389 103 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 SNORA63.7-201ENST00000365579 123 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 Y_RNA.424-201ENST00000384063 103 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 SNORA26.3-201ENST00000391119 136 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 SAR1AP2-201ENST00000392696 594 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 MTCO3P19-201ENST00000415864 321 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 CBX3P6-201ENST00000430257 527 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 RPL23AP22-201ENST00000437556 453 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 AC009296.1-201ENST00000443146 155 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 snoU13.14-201ENST00000459372 104 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 RPL36AP48-201ENST00000485521 314 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 RPL30P1-201ENST00000488676 339 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 MRPS35P2-201ENST00000508242 191 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 RNU1-143P-201ENST00000516296 146 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 SNORA40.14-201ENST00000516543 86 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 HSBP1P1-201ENST00000555205 166 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 MIR2682-201ENST00000580305 110 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 VN1R91P-201ENST00000594377 169 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 U1.23-201ENST00000610293 146 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 uc_338.25-201ENST00000613756 156 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 RNU1-68P-201ENST00000615382 146 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 U1.39-201ENST00000621562 146 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 MIR4272-201ENST00000635924 64 ntBASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHB1Q9Y5F3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 SNORA5B-201ENST00000363786 132 ntBASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 RNU4-42P-201ENST00000364738 142 ntBASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 RNU6-702P-201ENST00000364982 107 ntBASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 RNU6-1083P-201ENST00000384022 107 ntBASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 Y_RNA.526-201ENST00000384572 110 ntBASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 AL031121.1-201ENST00000406553 254 ntBASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 OR2AQ1P-201ENST00000451972 200 ntBASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 AC112492.4-201ENST00000456549 352 ntBASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 RN7SL863P-201ENST00000462370 296 ntBASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 AC006483.1-201ENST00000487308 313 ntBASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 RN7SL283P-201ENST00000489055 303 ntBASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 AIG1P1-201ENST00000503376 148 ntBASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 AL161670.1-201ENST00000554348 137 ntBASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHB1Q9Y5F3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.15□□□□□ -1.9
PCDHB1Q9Y5F3 MIR153-2-201ENST00000385225 87 ntBASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 RNA5SP293-201ENST00000410527 113 ntBASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 AL590135.1-201ENST00000422215 156 ntBASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 AC019205.3-201ENST00000424573 156 ntBASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 AC016700.2-201ENST00000446011 156 ntBASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 RNU7-169P-201ENST00000459456 61 ntBASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 AC087477.1-201ENST00000465747 340 ntBASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 AC093852.1-201ENST00000503587 266 ntBASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-1198P-201ENST00000516904 67 ntBASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 MIR2355-201ENST00000517199 87 ntBASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 AP002404.1-201ENST00000532005 451 ntBASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 AC079598.5-201ENST00000547460 117 ntBASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 MIR5188-201ENST00000583467 113 ntBASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 AC010928.2-201ENST00000588017 287 ntBASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PCDHB1Q9Y5F3 AL359854.1-201ENST00000614203 1594 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms