Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AL606923.1-201ENST00000406616 190 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 RNU2-63P-201ENST00000410792 194 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 RNU6-1068P-201ENST00000410958 103 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 SNORD56-201ENST00000413522 71 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 CYCSP33-201ENST00000414485 327 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AL365400.1-201ENST00000431854 640 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AL121601.2-201ENST00000438019 707 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 Z96811.1-201ENST00000445880 108 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 FGF7P6-202ENST00000451282 293 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 RNU5F-2P-201ENST00000516066 82 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 RNU1-86P-201ENST00000516108 154 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 Y_RNA.675-201ENST00000516389 149 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 RNU1-107P-201ENST00000516617 154 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AP005435.4-201ENST00000529514 284 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.35□□□□□ -2.19
SHANK1Q9Y566 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.35□□□□□ -2.19
SHANK1Q9Y566 MTND1P15-201ENST00000579262 949 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AC021646.1-201ENST00000605469 484 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AC096772.1-201ENST00000609146 564 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
SHANK1Q9Y566 Y_RNA.372-201ENST00000365599 102 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 RNU6-877P-201ENST00000383868 107 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 RNU6-1032P-201ENST00000384100 107 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 Y_RNA.453-201ENST00000384223 109 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 RNU6-658P-201ENST00000384606 106 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 OR9R1P-201ENST00000412200 877 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.35□□□□□ -2.19
SHANK1Q9Y566 USP9YP14-201ENST00000430663 563 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 MTCO2P3-201ENST00000442543 421 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 RPS3AP17-201ENST00000472594 777 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 MED28P2-201ENST00000475771 317 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AC116655.1-201ENST00000508324 901 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AP005902.1-201ENST00000521358 186 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.35□□□□□ -2.19
SHANK1Q9Y566 LINC00933-203ENST00000559812 219 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AC093249.1-201ENST00000567049 203 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 MIR5571-201ENST00000577998 113 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 MIR5194-201ENST00000582634 120 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AC068790.6-201ENST00000602558 258 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AP003465.2-201ENST00000602571 373 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AC002044.1-201ENST00000606707 158 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 U4.5-201ENST00000617137 123 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 MIR203B-201ENST00000636080 86 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 MIR6767-201ENST00000637302 66 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.35□□□□□ -2.19
SHANK1Q9Y566 MTND4P14-201ENST00000435799 1354 ntBASIC1.35□□□□□ -2.19
SHANK1Q9Y566 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SHANK1Q9Y566 Y_RNA.30-201ENST00000362572 97 ntBASIC1.34□□□□□ -2.19
SHANK1Q9Y566 RNU4-56P-201ENST00000364700 142 ntBASIC1.34□□□□□ -2.19
SHANK1Q9Y566 Y_RNA.378-201ENST00000365652 113 ntBASIC1.34□□□□□ -2.19
SHANK1Q9Y566 RNU6-997P-201ENST00000384725 107 ntBASIC1.34□□□□□ -2.19
SHANK1Q9Y566 RNU6-220P-201ENST00000390919 107 ntBASIC1.34□□□□□ -2.19
SHANK1Q9Y566 SNORA26.3-201ENST00000391119 136 ntBASIC1.34□□□□□ -2.19
SHANK1Q9Y566 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.34□□□□□ -2.19
SHANK1Q9Y566 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.34□□□□□ -2.19
SHANK1Q9Y566 ZNF885P-201ENST00000420174 1098 ntBASIC1.34□□□□□ -2.19
SHANK1Q9Y566 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.34□□□□□ -2.19
SHANK1Q9Y566 AC097463.2-201ENST00000421074 142 ntBASIC1.34□□□□□ -2.19
SHANK1Q9Y566 AL354695.1-201ENST00000427935 228 ntBASIC1.34□□□□□ -2.19
SHANK1Q9Y566 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.34□□□□□ -2.19
SHANK1Q9Y566 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.34□□□□□ -2.19
SHANK1Q9Y566 UBBP3-201ENST00000445497 241 ntBASIC1.34□□□□□ -2.19
SHANK1Q9Y566 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.34□□□□□ -2.19
SHANK1Q9Y566 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.34□□□□□ -2.19
SHANK1Q9Y566 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.34□□□□□ -2.19
SHANK1Q9Y566 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.34□□□□□ -2.19
SHANK1Q9Y566 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.34□□□□□ -2.19
SHANK1Q9Y566 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.34□□□□□ -2.19
SHANK1Q9Y566 AC079598.5-201ENST00000547460 117 ntBASIC1.34□□□□□ -2.19
SHANK1Q9Y566 AL157687.1-201ENST00000554853 619 ntBASIC1.34□□□□□ -2.19
SHANK1Q9Y566 MIR3672-201ENST00000584290 82 ntBASIC1.34□□□□□ -2.19
SHANK1Q9Y566 CTHRC1P1-201ENST00000605383 469 ntBASIC1.34□□□□□ -2.19
SHANK1Q9Y566 RNU6-89P-201ENST00000606519 100 ntBASIC1.34□□□□□ -2.19
SHANK1Q9Y566 AC024940.5-201ENST00000622889 474 ntBASIC1.34□□□□□ -2.19
SHANK1Q9Y566 ZNF680P1-201ENST00000436625 1469 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
SHANK1Q9Y566 RNU6-933P-201ENST00000384424 107 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 Y_RNA.516-201ENST00000384541 124 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 RNU6-1179P-201ENST00000384667 107 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 MIR147B-201ENST00000390185 80 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 CALM2P3-201ENST00000400429 449 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 RNA5SP390-201ENST00000410191 113 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 RNU6-1328P-201ENST00000410938 106 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 CALM1P1-201ENST00000442082 433 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 MTND1P18-201ENST00000448191 573 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 AF213884.2-201ENST00000510417 903 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 RNU6-377P-201ENST00000515965 102 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.34□□□□□ -2.2
SHANK1Q9Y566 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.34□□□□□ -2.2
SHANK1Q9Y566 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.34□□□□□ -2.2
SHANK1Q9Y566 AC023050.3-201ENST00000541142 333 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 AL133241.1-201ENST00000556832 487 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.34□□□□□ -2.2
SHANK1Q9Y566 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.34□□□□□ -2.2
SHANK1Q9Y566 AC008752.3-201ENST00000588113 712 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 AC092807.2-201ENST00000609367 243 ntBASIC1.34□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms