Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LSM4Q9Y4Z0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
LSM4Q9Y4Z0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LSM4Q9Y4Z0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LSM4Q9Y4Z0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 AL161431.1-201ENST00000618966 4205 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 RNY1P16-201ENST00000363063 111 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 SNORD115-32-201ENST00000364079 82 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 RNA5SP344-201ENST00000411081 104 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 RNA5SP492-201ENST00000411330 114 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 MTND4P28-201ENST00000426217 387 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 RPL23AP50-201ENST00000434149 455 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 AC107083.1-201ENST00000439643 279 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 OR2AQ1P-201ENST00000451972 200 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 AP000705.1-201ENST00000454567 350 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 RN7SL863P-201ENST00000462370 296 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 AC068781.1-201ENST00000488231 618 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 CKS1BP2-201ENST00000497342 240 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 AC093303.1-201ENST00000514549 295 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 RNU7-175P-201ENST00000515915 61 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 AC109329.2-201ENST00000519658 482 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 AC104581.2-201ENST00000572227 430 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 AL133255.1-201ENST00000606374 441 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 RMST_6.1-201ENST00000611980 203 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 AC092608.2-201ENST00000624427 218 ntBASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
LSM4Q9Y4Z0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 MTND4P29-201ENST00000503122 1372 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 AC135776.4-201ENST00000624300 1904 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 MTND5P10-201ENST00000603719 1809 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 AC073325.2-201ENST00000339545 159 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 Y_RNA.315-201ENST00000365117 102 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 RNU6-890P-201ENST00000384121 107 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 RNU6-1274P-201ENST00000384557 107 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 Y_RNA.535-201ENST00000384612 99 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 CBX3P6-201ENST00000430257 527 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 Z82188.1-201ENST00000436709 154 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 RPL17P19-201ENST00000489069 552 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 RNU6-470P-201ENST00000515954 104 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 RNU6-264P-201ENST00000517134 104 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 EIF4A1P12-201ENST00000551910 141 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 AL033523.1-201ENST00000605153 153 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 AL050343.2-201ENST00000607338 280 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 AC069234.5-201ENST00000611056 416 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 MIR7106-201ENST00000612419 65 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 AL365361.1-201ENST00000566942 3481 ntBASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LSM4Q9Y4Z0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
LSM4Q9Y4Z0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
LSM4Q9Y4Z0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.4□□□□□ -2.02
LSM4Q9Y4Z0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
LSM4Q9Y4Z0 Y_RNA.146-201ENST00000363549 102 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 U3.9-201ENST00000363823 204 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 SNORD32B-201ENST00000364460 84 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 RNA5SP125-201ENST00000364843 120 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 RNU6-378P-201ENST00000384324 107 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 MIR181B1-201ENST00000385240 110 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 SNORA12.2-201ENST00000391040 156 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 RNU6-1093P-201ENST00000391194 107 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 MIR208B-201ENST00000401172 77 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 AL451074.5-201ENST00000415894 435 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 RPS29P6-201ENST00000438196 145 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 snoU13.6-201ENST00000458785 104 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 SNORA48.11-201ENST00000517015 89 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 AC018630.3-201ENST00000542637 96 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 SUB1P3-201ENST00000564581 315 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 CYP2C61P-201ENST00000604072 290 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 AL355297.2-201ENST00000604792 129 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 AC090574.1-201ENST00000623186 233 ntBASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LSM4Q9Y4Z0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LSM4Q9Y4Z0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LSM4Q9Y4Z0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
LSM4Q9Y4Z0 Y_RNA.11-201ENST00000362375 109 ntBASIC2.39□□□□□ -2.03
LSM4Q9Y4Z0 Y_RNA.405-201ENST00000383979 100 ntBASIC2.39□□□□□ -2.03
LSM4Q9Y4Z0 Y_RNA.451-201ENST00000384200 100 ntBASIC2.39□□□□□ -2.03
LSM4Q9Y4Z0 RNU6-17P-201ENST00000384245 107 ntBASIC2.39□□□□□ -2.03
LSM4Q9Y4Z0 SNORA7.4-201ENST00000384249 137 ntBASIC2.39□□□□□ -2.03
LSM4Q9Y4Z0 Y_RNA.460-201ENST00000384255 102 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms