Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 RNA5SP205-201ENST00000364653 136 ntBASIC-0.85□□□□□ -2.55
NRXN3Q9Y4C0 MIR587-201ENST00000384845 96 ntBASIC-0.85□□□□□ -2.55
NRXN3Q9Y4C0 MIR548B-201ENST00000385247 97 ntBASIC-0.85□□□□□ -2.55
NRXN3Q9Y4C0 SNORA40.8-201ENST00000411034 126 ntBASIC-0.85□□□□□ -2.55
NRXN3Q9Y4C0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.85□□□□□ -2.55
NRXN3Q9Y4C0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.85□□□□□ -2.55
NRXN3Q9Y4C0 AC104332.1-201ENST00000440471 797 ntBASIC-0.85□□□□□ -2.55
NRXN3Q9Y4C0 RNU6-488P-201ENST00000515918 99 ntBASIC-0.85□□□□□ -2.55
NRXN3Q9Y4C0 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.85□□□□□ -2.55
NRXN3Q9Y4C0 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.85□□□□□ -2.55
NRXN3Q9Y4C0 AC122134.1-202ENST00000569111 1201 ntBASIC-0.85□□□□□ -2.55
NRXN3Q9Y4C0 AC008759.3-201ENST00000613300 508 ntBASIC-0.85□□□□□ -2.55
NRXN3Q9Y4C0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.85□□□□□ -2.55
NRXN3Q9Y4C0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.85□□□□□ -2.55
NRXN3Q9Y4C0 RNU6-441P-201ENST00000384545 106 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 ZNF886P-201ENST00000450781 723 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 RPS27AP8-201ENST00000452665 445 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 RNU7-159P-201ENST00000459284 62 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 U8.21-201ENST00000459536 136 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 RNU6-678P-201ENST00000516832 109 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 AL442163.3-201ENST00000554110 156 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 AL136317.1-201ENST00000612653 226 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 AC119674.1-220ENST00000641502 1048 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 SNORD83B-201ENST00000386745 93 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 RPL22P22-201ENST00000395439 379 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 MIR548H2-201ENST00000408874 88 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 snoU13.27-201ENST00000459278 104 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 AC010460.2-201ENST00000509054 677 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 AC022483.1-201ENST00000514020 567 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 CR383656.7-201ENST00000548164 174 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 AC004584.2-201ENST00000570407 410 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 MIR4436A-201ENST00000585278 85 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 AC018926.1-201ENST00000616335 435 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 AC112487.2-201ENST00000637950 304 ntBASIC-0.86□□□□□ -2.55
NRXN3Q9Y4C0 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.87□□□□□ -2.55
NRXN3Q9Y4C0 MIR1303-201ENST00000408625 86 ntBASIC-0.87□□□□□ -2.55
NRXN3Q9Y4C0 RPL31P53-201ENST00000457065 348 ntBASIC-0.87□□□□□ -2.55
NRXN3Q9Y4C0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.87□□□□□ -2.55
NRXN3Q9Y4C0 AC109445.1-201ENST00000512356 383 ntBASIC-0.87□□□□□ -2.55
NRXN3Q9Y4C0 SCARNA17-201ENST00000516183 144 ntBASIC-0.87□□□□□ -2.55
NRXN3Q9Y4C0 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.87□□□□□ -2.55
NRXN3Q9Y4C0 RNU6-858P-201ENST00000362436 107 ntBASIC-0.88□□□□□ -2.55
NRXN3Q9Y4C0 RNU6-778P-201ENST00000363269 103 ntBASIC-0.88□□□□□ -2.55
NRXN3Q9Y4C0 RNU6-331P-201ENST00000384724 107 ntBASIC-0.88□□□□□ -2.55
NRXN3Q9Y4C0 SNORA12.1-201ENST00000390873 148 ntBASIC-0.88□□□□□ -2.55
NRXN3Q9Y4C0 RNU4-46P-201ENST00000410818 138 ntBASIC-0.88□□□□□ -2.55
NRXN3Q9Y4C0 AC011233.1-201ENST00000422812 283 ntBASIC-0.88□□□□□ -2.55
NRXN3Q9Y4C0 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.88□□□□□ -2.55
NRXN3Q9Y4C0 AC119618.1-201ENST00000434191 222 ntBASIC-0.88□□□□□ -2.55
NRXN3Q9Y4C0 AL008629.1-201ENST00000438615 184 ntBASIC-0.88□□□□□ -2.55
NRXN3Q9Y4C0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.88□□□□□ -2.55
NRXN3Q9Y4C0 AC022616.3-201ENST00000523940 148 ntBASIC-0.88□□□□□ -2.55
NRXN3Q9Y4C0 AL049545.1-201ENST00000401856 572 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 MTCO2P34-201ENST00000421994 607 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 TXNL1P1-201ENST00000429528 554 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 SCARNA18-201ENST00000459004 134 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 AC107297.1-201ENST00000459991 176 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 AC113398.2-201ENST00000507630 558 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 RNU6-91P-201ENST00000607774 107 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 AL109755.1-201ENST00000401791 649 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 MIR548L-201ENST00000408303 86 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 RPL23AP50-201ENST00000434149 455 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 SPINT5P-201ENST00000448174 155 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 AC087499.4-201ENST00000448505 178 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 MTCO3P10-201ENST00000455912 772 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 AC113420.1-201ENST00000507903 571 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 RNU6-947P-201ENST00000516264 106 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 SNORA27.4-201ENST00000516650 95 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 MIR3165-201ENST00000579874 75 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 AL590229.1-201ENST00000603497 542 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 AC004853.1-201ENST00000604902 698 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 U2.21-201ENST00000637295 81 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 MIR4788-201ENST00000639104 80 ntBASIC-0.89□□□□□ -2.55
NRXN3Q9Y4C0 RNU6-743P-201ENST00000364151 106 ntBASIC-0.9□□□□□ -2.55
NRXN3Q9Y4C0 SNORA25.7-201ENST00000364375 127 ntBASIC-0.9□□□□□ -2.55
NRXN3Q9Y4C0 RNU6-480P-201ENST00000384332 107 ntBASIC-0.9□□□□□ -2.55
NRXN3Q9Y4C0 RNU6-269P-201ENST00000391077 97 ntBASIC-0.9□□□□□ -2.55
NRXN3Q9Y4C0 AC007919.1-201ENST00000429380 217 ntBASIC-0.9□□□□□ -2.55
NRXN3Q9Y4C0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.9□□□□□ -2.55
NRXN3Q9Y4C0 RNU6-333P-201ENST00000459117 107 ntBASIC-0.9□□□□□ -2.55
NRXN3Q9Y4C0 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.9□□□□□ -2.55
NRXN3Q9Y4C0 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.9□□□□□ -2.55
NRXN3Q9Y4C0 RNA5SP268-201ENST00000516828 124 ntBASIC-0.9□□□□□ -2.55
NRXN3Q9Y4C0 AL356057.1-201ENST00000533798 831 ntBASIC-0.9□□□□□ -2.55
NRXN3Q9Y4C0 MIR412-201ENST00000362142 91 ntBASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms