Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
R3HCC1Q9Y3T6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-1301P-201ENST00000362724 104 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 RNU4-50P-201ENST00000364361 141 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-196P-201ENST00000384315 107 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 RNU1-57P-201ENST00000384491 166 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 Y_RNA.526-201ENST00000384572 110 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-541P-201ENST00000384709 110 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 SNORA46-201ENST00000384762 135 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 Y_RNA.574-201ENST00000384766 95 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 U3.19-201ENST00000390893 196 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 RNU1-139P-201ENST00000391307 165 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 AL358075.3-201ENST00000426289 226 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 WARS2P1-201ENST00000429678 537 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 RPL7P49-201ENST00000471402 708 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 AL121594.1-201ENST00000475906 575 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 RPL31P41-201ENST00000477967 372 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-397P-201ENST00000516226 104 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 AC008739.2-201ENST00000597006 317 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 AL390123.1-201ENST00000603216 237 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 AL034555.1-201ENST00000604816 211 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 PRR13P7-201ENST00000605538 430 ntBASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
R3HCC1Q9Y3T6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 AL359854.1-201ENST00000614203 1594 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 Y_RNA.149-201ENST00000363558 117 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 RNA5SP139-201ENST00000364340 117 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-1027P-201ENST00000383998 107 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 Y_RNA.471-201ENST00000384312 102 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 MIR10B-201ENST00000385011 110 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 MIR549A-201ENST00000385268 96 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 SNORD17-201ENST00000390930 237 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 RPL21P1-201ENST00000399532 476 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-130P-201ENST00000411112 103 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 AL353705.1-201ENST00000433468 480 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 RPS15AP7-201ENST00000439294 405 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 AC115115.1-201ENST00000449927 248 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 UQCRHP3-201ENST00000451503 251 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 RPL23AP70-201ENST00000483361 460 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 MIR2355-201ENST00000517199 87 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 AC091144.1-201ENST00000519573 138 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 AC034114.1-201ENST00000520293 285 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 U6.92-201ENST00000636464 89 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 MAPK10-266ENST00000641066 6555 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 AC000403.1-201ENST00000613696 3585 ntBASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
R3HCC1Q9Y3T6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 RNU4-15P-201ENST00000362613 141 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-1159P-201ENST00000362933 107 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 Y_RNA.176-201ENST00000363815 109 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 Y_RNA.214-201ENST00000364201 112 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 SNORA63.7-201ENST00000365579 123 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-318P-201ENST00000384283 103 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 RNY3P4-201ENST00000384428 101 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 RNA5SP171-201ENST00000391071 115 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 CBX3P9-201ENST00000402326 552 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 RN7SKP111-201ENST00000410349 271 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 RNA5SP344-201ENST00000411081 104 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 RPS26P42-201ENST00000413485 326 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 AC097463.2-201ENST00000421074 142 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 ELOCP20-201ENST00000422460 345 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 RPEP5-201ENST00000441137 268 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 IPO7P1-201ENST00000442031 636 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 AC073910.1-201ENST00000445047 438 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 AC091179.1-201ENST00000461606 579 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-1114P-201ENST00000516022 107 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 RNU2-53P-201ENST00000516257 147 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 CYP4A27P-201ENST00000567218 190 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 MIR4765-201ENST00000585007 77 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 AC125232.2-201ENST00000592457 143 ntBASIC3.68□□□□□ -1.82
R3HCC1Q9Y3T6 AC017071.1-201ENST00000564407 2204 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 Y_RNA.26-201ENST00000362539 101 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 SNORA71.3-201ENST00000362582 128 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-655P-201ENST00000362858 107 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 RNU1-76P-201ENST00000362903 159 ntBASIC3.67□□□□□ -1.82
R3HCC1Q9Y3T6 RNU6-1210P-201ENST00000363775 107 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms