Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 AC093578.1-201ENST00000415219 368 ntBASIC4.39□□□□□ -1.71
NOD1Q9Y239 SEPT7P4-201ENST00000437076 306 ntBASIC4.39□□□□□ -1.71
NOD1Q9Y239 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NOD1Q9Y239 U8.19-201ENST00000459095 133 ntBASIC4.39□□□□□ -1.71
NOD1Q9Y239 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.39□□□□□ -1.71
NOD1Q9Y239 RNU1-95P-201ENST00000516357 160 ntBASIC4.39□□□□□ -1.71
NOD1Q9Y239 RNU1-128P-201ENST00000516704 160 ntBASIC4.39□□□□□ -1.71
NOD1Q9Y239 EIF4A1P12-201ENST00000551910 141 ntBASIC4.39□□□□□ -1.71
NOD1Q9Y239 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.39□□□□□ -1.71
NOD1Q9Y239 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.39□□□□□ -1.71
NOD1Q9Y239 AL137843.1-201ENST00000605078 385 ntBASIC4.39□□□□□ -1.71
NOD1Q9Y239 SNORD11B-201ENST00000607707 90 ntBASIC4.39□□□□□ -1.71
NOD1Q9Y239 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.39□□□□□ -1.71
NOD1Q9Y239 TCL6_2.1-201ENST00000615162 119 ntBASIC4.39□□□□□ -1.71
NOD1Q9Y239 AC005562.2-201ENST00000618264 111 ntBASIC4.39□□□□□ -1.71
NOD1Q9Y239 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NOD1Q9Y239 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
NOD1Q9Y239 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
NOD1Q9Y239 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NOD1Q9Y239 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
NOD1Q9Y239 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
NOD1Q9Y239 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
NOD1Q9Y239 SNORA5A-201ENST00000384111 134 ntBASIC4.38□□□□□ -1.71
NOD1Q9Y239 Y_RNA.488-201ENST00000384403 102 ntBASIC4.38□□□□□ -1.71
NOD1Q9Y239 MIR147B-201ENST00000390185 80 ntBASIC4.38□□□□□ -1.71
NOD1Q9Y239 AC004866.1-201ENST00000411748 78 ntBASIC4.38□□□□□ -1.71
NOD1Q9Y239 AL139247.1-201ENST00000422768 325 ntBASIC4.38□□□□□ -1.71
NOD1Q9Y239 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.38□□□□□ -1.71
NOD1Q9Y239 AC004386.2-201ENST00000441858 148 ntBASIC4.38□□□□□ -1.71
NOD1Q9Y239 RPS20P10-201ENST00000451209 253 ntBASIC4.38□□□□□ -1.71
NOD1Q9Y239 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.38□□□□□ -1.71
NOD1Q9Y239 AC010099.1-201ENST00000455434 375 ntBASIC4.38□□□□□ -1.71
NOD1Q9Y239 snoU13.14-201ENST00000459372 104 ntBASIC4.38□□□□□ -1.71
NOD1Q9Y239 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.38□□□□□ -1.71
NOD1Q9Y239 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.38□□□□□ -1.71
NOD1Q9Y239 RNU6-344P-201ENST00000516635 111 ntBASIC4.38□□□□□ -1.71
NOD1Q9Y239 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.38□□□□□ -1.71
NOD1Q9Y239 AP000867.2-201ENST00000532468 320 ntBASIC4.38□□□□□ -1.71
NOD1Q9Y239 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.38□□□□□ -1.71
NOD1Q9Y239 AC087499.8-201ENST00000578406 226 ntBASIC4.38□□□□□ -1.71
NOD1Q9Y239 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.38□□□□□ -1.71
NOD1Q9Y239 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.38□□□□□ -1.71
NOD1Q9Y239 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NOD1Q9Y239 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NOD1Q9Y239 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NOD1Q9Y239 AC010889.1-201ENST00000566193 2666 ntBASIC4.37□□□□□ -1.71
NOD1Q9Y239 RNU4-15P-201ENST00000362613 141 ntBASIC4.37□□□□□ -1.71
NOD1Q9Y239 RNU4-84P-201ENST00000364200 139 ntBASIC4.37□□□□□ -1.71
NOD1Q9Y239 RNU6-198P-201ENST00000384258 104 ntBASIC4.37□□□□□ -1.71
NOD1Q9Y239 RNU6-131P-201ENST00000391144 107 ntBASIC4.37□□□□□ -1.71
NOD1Q9Y239 MIR1251-201ENST00000408552 70 ntBASIC4.37□□□□□ -1.71
NOD1Q9Y239 AIMP1P2-201ENST00000425294 312 ntBASIC4.37□□□□□ -1.71
NOD1Q9Y239 AL049830.2-201ENST00000480072 201 ntBASIC4.37□□□□□ -1.71
NOD1Q9Y239 AC005840.1-201ENST00000498412 377 ntBASIC4.37□□□□□ -1.71
NOD1Q9Y239 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.37□□□□□ -1.71
NOD1Q9Y239 RNU1-117P-201ENST00000517041 158 ntBASIC4.37□□□□□ -1.71
NOD1Q9Y239 AC100767.1-201ENST00000528178 123 ntBASIC4.37□□□□□ -1.71
NOD1Q9Y239 MIR5006-201ENST00000583027 110 ntBASIC4.37□□□□□ -1.71
NOD1Q9Y239 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.37□□□□□ -1.71
NOD1Q9Y239 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.37□□□□□ -1.71
NOD1Q9Y239 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NOD1Q9Y239 AC091895.1-201ENST00000624494 256 ntBASIC4.37□□□□□ -1.71
NOD1Q9Y239 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.37□□□□□ -1.71
NOD1Q9Y239 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
NOD1Q9Y239 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.36□□□□□ -1.71
NOD1Q9Y239 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NOD1Q9Y239 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.36□□□□□ -1.71
NOD1Q9Y239 U3.9-201ENST00000363823 204 ntBASIC4.36□□□□□ -1.71
NOD1Q9Y239 RNA5SP399-201ENST00000364003 117 ntBASIC4.36□□□□□ -1.71
NOD1Q9Y239 RNU6-801P-201ENST00000364087 105 ntBASIC4.36□□□□□ -1.71
NOD1Q9Y239 AL162725.1-201ENST00000435405 301 ntBASIC4.36□□□□□ -1.71
NOD1Q9Y239 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.36□□□□□ -1.71
NOD1Q9Y239 RNU7-23P-201ENST00000459465 62 ntBASIC4.36□□□□□ -1.71
NOD1Q9Y239 AP002884.2-201ENST00000471647 395 ntBASIC4.36□□□□□ -1.71
NOD1Q9Y239 RPL23AP70-201ENST00000483361 460 ntBASIC4.36□□□□□ -1.71
NOD1Q9Y239 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.36□□□□□ -1.71
NOD1Q9Y239 AC012493.2-201ENST00000595083 291 ntBASIC4.36□□□□□ -1.71
NOD1Q9Y239 AC068205.3-201ENST00000636385 468 ntBASIC4.36□□□□□ -1.71
NOD1Q9Y239 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.36□□□□□ -1.71
NOD1Q9Y239 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NOD1Q9Y239 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NOD1Q9Y239 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NOD1Q9Y239 SNORA18.2-201ENST00000383865 132 ntBASIC4.35□□□□□ -1.71
NOD1Q9Y239 U8.11-201ENST00000384699 133 ntBASIC4.35□□□□□ -1.71
NOD1Q9Y239 U8.12-201ENST00000384701 133 ntBASIC4.35□□□□□ -1.71
NOD1Q9Y239 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NOD1Q9Y239 RNU2-51P-201ENST00000410708 197 ntBASIC4.35□□□□□ -1.71
NOD1Q9Y239 RPS29P4-201ENST00000414733 161 ntBASIC4.35□□□□□ -1.71
NOD1Q9Y239 HMGN2P31-201ENST00000432430 273 ntBASIC4.35□□□□□ -1.71
NOD1Q9Y239 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.35□□□□□ -1.71
NOD1Q9Y239 U8.18-201ENST00000459285 133 ntBASIC4.35□□□□□ -1.71
NOD1Q9Y239 AC145146.1-201ENST00000496370 254 ntBASIC4.35□□□□□ -1.71
NOD1Q9Y239 AC110768.1-201ENST00000509222 400 ntBASIC4.35□□□□□ -1.71
NOD1Q9Y239 AC026726.1-201ENST00000512859 601 ntBASIC4.35□□□□□ -1.71
NOD1Q9Y239 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.35□□□□□ -1.71
NOD1Q9Y239 AC136628.3-201ENST00000521868 290 ntBASIC4.35□□□□□ -1.71
NOD1Q9Y239 DEFB131C-201ENST00000528817 165 ntBASIC4.35□□□□□ -1.71
NOD1Q9Y239 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.35□□□□□ -1.71
NOD1Q9Y239 AL161756.2-201ENST00000604597 246 ntBASIC4.35□□□□□ -1.71
NOD1Q9Y239 AL078604.3-201ENST00000615580 211 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 269.3 ms