Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 MAPK10-372ENST00000641954 3413 ntBASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 AP001486.2-201ENST00000561652 5113 ntBASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 RNU6-818P-201ENST00000364837 108 ntBASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 RNU1-64P-201ENST00000365443 163 ntBASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 RNA5SP424-201ENST00000390988 115 ntBASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 RNA5SP390-201ENST00000410191 113 ntBASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 RN7SKP53-201ENST00000411337 315 ntBASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 AC009963.1-201ENST00000417265 157 ntBASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 VDAC1P3-201ENST00000434069 851 ntBASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 Y_RNA.637-201ENST00000459424 114 ntBASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 AC090525.1-201ENST00000479116 478 ntBASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 AC100767.1-201ENST00000528178 123 ntBASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 MIR4644-201ENST00000579929 84 ntBASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 AL365222.1-201ENST00000614661 98 ntBASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 OTUD4P1-201ENST00000237841 3067 ntBASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
AP4E1Q9UPM8 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 AC006504.1-201ENST00000562493 3666 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 RNU1-18P-201ENST00000363062 164 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 Y_RNA.182-201ENST00000363880 111 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 RNU6-270P-201ENST00000364131 105 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 RNA5SP479-201ENST00000364858 117 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 MIR569-201ENST00000385228 96 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 SNORA40.19-201ENST00000390846 128 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 PTMAP5-201ENST00000393073 333 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 BPY2DP-201ENST00000422208 265 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 RPL26P9-201ENST00000457466 433 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 RN7SL93P-201ENST00000463035 293 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 RN7SL132P-201ENST00000478131 296 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 AC006199.1-201ENST00000548728 219 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 AC021739.1-201ENST00000559631 174 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 MIR5685-201ENST00000579080 79 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 AL034408.1-202ENST00000636088 415 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 MIR3674-201ENST00000636576 68 ntBASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.88□□□□□ -1.79
AP4E1Q9UPM8 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 RNU6-1310P-201ENST00000384153 107 ntBASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 RNU6-1248P-201ENST00000391096 64 ntBASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 AL138878.1-201ENST00000405131 347 ntBASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 RNU6-257P-201ENST00000410238 98 ntBASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 AC096649.2-201ENST00000416186 393 ntBASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 AL139247.1-201ENST00000422768 325 ntBASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 RNA5SP468-201ENST00000516782 93 ntBASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 RNU6-928P-201ENST00000516876 104 ntBASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 ACA59.2-201ENST00000517061 156 ntBASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 RNU2-12P-201ENST00000517216 168 ntBASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 CYP4A27P-201ENST00000567218 190 ntBASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 AC009127.3-201ENST00000570531 403 ntBASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 MIR3690-201ENST00000580266 75 ntBASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 AC005520.5-201ENST00000613926 164 ntBASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 Y_RNA.778-201ENST00000620203 90 ntBASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
AP4E1Q9UPM8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 RNU1-62P-201ENST00000362599 164 ntBASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 RNU6-275P-201ENST00000364910 107 ntBASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 Y_RNA.329-201ENST00000365209 107 ntBASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 RNU6-763P-201ENST00000390865 106 ntBASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 RN7SKP156-201ENST00000410308 342 ntBASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 YPEL5P1-201ENST00000419731 367 ntBASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 RN7SKP83-201ENST00000516512 178 ntBASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 AC008011.1-201ENST00000545989 227 ntBASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 NACAP3-201ENST00000552100 481 ntBASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 SNORD98-201ENST00000636377 67 ntBASIC3.86□□□□□ -1.79
AP4E1Q9UPM8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms