Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC022447.4-201ENST00000504053 364 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 SNORA48.11-201ENST00000517015 89 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 AC068137.4-201ENST00000638485 296 ntBASIC3.73□□□□□ -1.81
SHROOM4Q9ULL8 RNU6-1285P-201ENST00000363480 105 ntBASIC3.72□□□□□ -1.81
SHROOM4Q9ULL8 Y_RNA.231-201ENST00000364358 102 ntBASIC3.72□□□□□ -1.81
SHROOM4Q9ULL8 RNU6-392P-201ENST00000364926 101 ntBASIC3.72□□□□□ -1.81
SHROOM4Q9ULL8 RNU6-908P-201ENST00000410160 94 ntBASIC3.72□□□□□ -1.81
SHROOM4Q9ULL8 RNU2-20P-201ENST00000410425 191 ntBASIC3.72□□□□□ -1.81
SHROOM4Q9ULL8 AL590556.1-201ENST00000423231 483 ntBASIC3.72□□□□□ -1.81
SHROOM4Q9ULL8 AC078809.1-201ENST00000427601 140 ntBASIC3.72□□□□□ -1.81
SHROOM4Q9ULL8 SNRPGP7-201ENST00000469016 106 ntBASIC3.72□□□□□ -1.81
SHROOM4Q9ULL8 AC104435.1-201ENST00000483483 166 ntBASIC3.72□□□□□ -1.81
SHROOM4Q9ULL8 TRMT112P2-201ENST00000512910 132 ntBASIC3.72□□□□□ -1.81
SHROOM4Q9ULL8 RNA5SP490-201ENST00000517141 136 ntBASIC3.72□□□□□ -1.81
SHROOM4Q9ULL8 MTND1P35-201ENST00000526739 508 ntBASIC3.72□□□□□ -1.81
SHROOM4Q9ULL8 AC109635.3-201ENST00000529536 185 ntBASIC3.72□□□□□ -1.81
SHROOM4Q9ULL8 AL118558.2-201ENST00000556294 238 ntBASIC3.72□□□□□ -1.81
SHROOM4Q9ULL8 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SHROOM4Q9ULL8 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.71□□□□□ -1.81
SHROOM4Q9ULL8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
SHROOM4Q9ULL8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 Y_RNA.122-201ENST00000363331 96 ntBASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 RNY4P14-201ENST00000363656 96 ntBASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 Y_RNA.373-201ENST00000365600 103 ntBASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 RNU6-214P-201ENST00000384130 107 ntBASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 RNU6-692P-201ENST00000384496 107 ntBASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 Y_RNA.573-201ENST00000384763 105 ntBASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 AF274854.1-201ENST00000413236 615 ntBASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 USP9YP18-201ENST00000425912 695 ntBASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 RPL23AP7-203ENST00000449021 469 ntBASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 RNU5F-2P-201ENST00000516066 82 ntBASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 RNA5SP402-201ENST00000517148 110 ntBASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 RNU1-104P-201ENST00000517280 175 ntBASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 AC016957.1-201ENST00000534895 309 ntBASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 MIR3126-201ENST00000577443 74 ntBASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 AC010525.2-201ENST00000590920 195 ntBASIC3.71□□□□□ -1.82
SHROOM4Q9ULL8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHROOM4Q9ULL8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SHROOM4Q9ULL8 RNU4-20P-201ENST00000365601 151 ntBASIC3.7□□□□□ -1.82
SHROOM4Q9ULL8 MIR524-201ENST00000385242 87 ntBASIC3.7□□□□□ -1.82
SHROOM4Q9ULL8 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SHROOM4Q9ULL8 SNORA40.18-201ENST00000391200 128 ntBASIC3.7□□□□□ -1.82
SHROOM4Q9ULL8 AL627390.1-201ENST00000396055 340 ntBASIC3.7□□□□□ -1.82
SHROOM4Q9ULL8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.7□□□□□ -1.82
SHROOM4Q9ULL8 RPS29P11-201ENST00000496507 171 ntBASIC3.7□□□□□ -1.82
SHROOM4Q9ULL8 SNORA19.2-201ENST00000516013 114 ntBASIC3.7□□□□□ -1.82
SHROOM4Q9ULL8 Y_RNA.38-201ENST00000362617 102 ntBASIC3.69□□□□□ -1.82
SHROOM4Q9ULL8 RNA5SP393-201ENST00000363423 117 ntBASIC3.69□□□□□ -1.82
SHROOM4Q9ULL8 RNU6-43P-201ENST00000384302 107 ntBASIC3.69□□□□□ -1.82
SHROOM4Q9ULL8 MIR1276-201ENST00000408707 83 ntBASIC3.69□□□□□ -1.82
SHROOM4Q9ULL8 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.69□□□□□ -1.82
SHROOM4Q9ULL8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.69□□□□□ -1.82
SHROOM4Q9ULL8 RN7SKP256-201ENST00000517201 314 ntBASIC3.69□□□□□ -1.82
SHROOM4Q9ULL8 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.69□□□□□ -1.82
SHROOM4Q9ULL8 MIR5692C1-201ENST00000585309 91 ntBASIC3.69□□□□□ -1.82
SHROOM4Q9ULL8 AL121757.2-201ENST00000611223 313 ntBASIC3.69□□□□□ -1.82
SHROOM4Q9ULL8 AC121333.1-201ENST00000567488 2709 ntBASIC3.68□□□□□ -1.82
SHROOM4Q9ULL8 snoU2_19.1-201ENST00000362361 80 ntBASIC3.68□□□□□ -1.82
SHROOM4Q9ULL8 RNY3P3-201ENST00000363816 102 ntBASIC3.68□□□□□ -1.82
SHROOM4Q9ULL8 RNU4-56P-201ENST00000364700 142 ntBASIC3.68□□□□□ -1.82
SHROOM4Q9ULL8 MIR514A2-201ENST00000385131 88 ntBASIC3.68□□□□□ -1.82
SHROOM4Q9ULL8 MIR514A3-201ENST00000385132 88 ntBASIC3.68□□□□□ -1.82
SHROOM4Q9ULL8 MTCO1P21-201ENST00000416634 589 ntBASIC3.68□□□□□ -1.82
SHROOM4Q9ULL8 AC244670.1-201ENST00000436879 112 ntBASIC3.68□□□□□ -1.82
SHROOM4Q9ULL8 AC068781.1-201ENST00000488231 618 ntBASIC3.68□□□□□ -1.82
SHROOM4Q9ULL8 AC007375.1-201ENST00000554513 578 ntBASIC3.68□□□□□ -1.82
SHROOM4Q9ULL8 MIR4446-201ENST00000578505 67 ntBASIC3.68□□□□□ -1.82
SHROOM4Q9ULL8 MIR3136-201ENST00000583498 78 ntBASIC3.68□□□□□ -1.82
SHROOM4Q9ULL8 AL161423.1-201ENST00000613700 262 ntBASIC3.68□□□□□ -1.82
SHROOM4Q9ULL8 SNORA67.1-201ENST00000364749 141 ntBASIC3.67□□□□□ -1.82
SHROOM4Q9ULL8 RNU6-373P-201ENST00000411247 98 ntBASIC3.67□□□□□ -1.82
SHROOM4Q9ULL8 AL353752.1-201ENST00000454946 260 ntBASIC3.67□□□□□ -1.82
SHROOM4Q9ULL8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.67□□□□□ -1.82
SHROOM4Q9ULL8 Z82209.1-201ENST00000422141 2135 ntBASIC3.67□□□□□ -1.82
SHROOM4Q9ULL8 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHROOM4Q9ULL8 Y_RNA.554-201ENST00000384672 102 ntBASIC3.67□□□□□ -1.82
SHROOM4Q9ULL8 MIR450B-201ENST00000401182 78 ntBASIC3.67□□□□□ -1.82
SHROOM4Q9ULL8 HMGB3P2-201ENST00000411913 584 ntBASIC3.67□□□□□ -1.82
SHROOM4Q9ULL8 TPRKBP2-201ENST00000565969 475 ntBASIC3.67□□□□□ -1.82
SHROOM4Q9ULL8 AC068790.6-201ENST00000602558 258 ntBASIC3.67□□□□□ -1.82
SHROOM4Q9ULL8 ELOCP5-201ENST00000604924 333 ntBASIC3.67□□□□□ -1.82
SHROOM4Q9ULL8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
SHROOM4Q9ULL8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.66□□□□□ -1.82
SHROOM4Q9ULL8 Y_RNA.6-201ENST00000362350 114 ntBASIC3.66□□□□□ -1.82
SHROOM4Q9ULL8 RNU6-546P-201ENST00000383991 107 ntBASIC3.66□□□□□ -1.82
SHROOM4Q9ULL8 RNU6-142P-201ENST00000384019 107 ntBASIC3.66□□□□□ -1.82
SHROOM4Q9ULL8 SNORD73A-201ENST00000386062 65 ntBASIC3.66□□□□□ -1.82
SHROOM4Q9ULL8 BTF3L4P2-201ENST00000392798 346 ntBASIC3.66□□□□□ -1.82
SHROOM4Q9ULL8 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.66□□□□□ -1.82
SHROOM4Q9ULL8 HSPE1P4-201ENST00000550617 308 ntBASIC3.66□□□□□ -1.82
SHROOM4Q9ULL8 RPS3AP23-202ENST00000574601 686 ntBASIC3.66□□□□□ -1.82
SHROOM4Q9ULL8 AP000560.1-201ENST00000624150 1937 ntBASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms