Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 RNU6-933P-201ENST00000384424 107 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 Y_RNA.579-201ENST00000390939 94 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 RNU6-174P-201ENST00000410406 106 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 Y_RNA.653-201ENST00000459091 95 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 SNORA9.3-201ENST00000516383 129 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 Y_RNA.701-201ENST00000516812 110 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 AP005902.1-201ENST00000521358 186 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 AC010186.2-204ENST00000537668 439 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 AC078795.3-201ENST00000602913 472 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 AL353997.5-201ENST00000618886 171 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 MIR3529-201ENST00000637713 78 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 AC241585.2-209ENST00000638217 143 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 HAUS6P2-201ENST00000433254 2404 ntBASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HDAC9Q9UKV0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.15□□□□□ -1.9
HDAC9Q9UKV0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HDAC9Q9UKV0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 SNORD56.1-201ENST00000362913 68 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 RNU6-487P-201ENST00000365430 104 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 RNU6-622P-201ENST00000384272 103 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 RNU6-692P-201ENST00000384496 107 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 RNU6-748P-201ENST00000384648 107 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 RNU6-19P-201ENST00000384718 107 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 AP000275.1-201ENST00000411943 390 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 AL591043.1-201ENST00000432461 424 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 AC004383.1-201ENST00000438135 289 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 RPS29P6-201ENST00000438196 145 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 RPL21P2-201ENST00000440049 481 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 GZMAP1-201ENST00000503054 631 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 AC109446.1-201ENST00000566172 220 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 AP001836.1-201ENST00000604675 523 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 AC018889.1-201ENST00000605372 397 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 MIR8076-201ENST00000611401 83 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 U4.3-201ENST00000621047 82 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 MIR7157-201ENST00000635801 60 ntBASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HDAC9Q9UKV0 RBBP8P1-201ENST00000449447 1844 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 RNA5SP289-201ENST00000362332 137 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 MIR181A2-201ENST00000384863 110 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 MIR27B-201ENST00000385129 97 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 AL354751.2-201ENST00000415471 210 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 AC009963.1-201ENST00000417265 157 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 Z82205.1-201ENST00000428456 297 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 MTND3P9-201ENST00000429526 346 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 AC007677.1-201ENST00000445757 515 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 RPL30P15-201ENST00000457129 321 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 AC008571.1-201ENST00000467232 300 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 AC097473.1-201ENST00000508142 408 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 RNA5SP384-201ENST00000516615 116 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 RNU6-1153P-201ENST00000516760 105 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 AC093249.1-201ENST00000567049 203 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 MIR4635-201ENST00000583759 79 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 PISRT1.1-201ENST00000616930 107 ntBASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HDAC9Q9UKV0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 RNU6-227P-201ENST00000362865 103 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 Y_RNA.187-201ENST00000363918 113 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 SNORD114-30-201ENST00000364448 72 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 SNORD42.2-201ENST00000365570 69 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 MIR521-1-201ENST00000384902 87 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 MIR181B1-201ENST00000385240 110 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 SNORD88.1-201ENST00000408684 91 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 RN7SKP123-201ENST00000410732 291 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 RNA5SP344-201ENST00000411081 104 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 USMG5P1-201ENST00000425964 177 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 HMGN2P3-201ENST00000433603 273 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 HMGN2P5-201ENST00000436882 273 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 AC132942.1-201ENST00000486753 483 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 AC114801.2-201ENST00000503825 781 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 ACA59.1-201ENST00000515966 143 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 RNU5B-3P-201ENST00000516601 115 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 CKS1BP7-201ENST00000522230 235 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 MTCO3P13-201ENST00000577757 781 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 AC090897.2-201ENST00000581715 130 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 uc_338.14-201ENST00000613162 166 ntBASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
HDAC9Q9UKV0 MTND5P30-201ENST00000452896 1731 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms