Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 RNU1-13P-201ENST00000384499 162 ntBASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 MIR93-201ENST00000385024 80 ntBASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 MIR29B2-201ENST00000385055 81 ntBASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 SNORA26.5-201ENST00000391215 123 ntBASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 RNA5SP317-201ENST00000410176 116 ntBASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 RNA5SP311-201ENST00000411290 116 ntBASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 EBAG9P1-201ENST00000418955 543 ntBASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 AC097463.2-201ENST00000421074 142 ntBASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 AL135790.2-201ENST00000437701 267 ntBASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 RPL23AP52-201ENST00000439311 478 ntBASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 RNA5SP315-201ENST00000516340 116 ntBASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 RNA5SP312-201ENST00000517068 116 ntBASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 TVP23BP1-201ENST00000557500 617 ntBASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 MIR1254-2-201ENST00000579553 63 ntBASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 RNA5SP196-201ENST00000625967 102 ntBASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 U6.115-201ENST00000636045 103 ntBASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
FOXD3Q9UJU5 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 SPRR2C-201ENST00000290702 219 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 AP002088.1-201ENST00000382740 395 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 RNU6-1117P-201ENST00000384525 104 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 SNORA8.3-201ENST00000384679 139 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 SNORD66.1-201ENST00000391230 76 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 AL357075.1-201ENST00000404107 726 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 AL445584.1-201ENST00000431451 330 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 HMGN2P31-201ENST00000432430 273 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 SEPT7P4-201ENST00000437076 306 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 AC146507.2-201ENST00000460608 476 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 RPL21P129-201ENST00000491732 478 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 AC146944.2-203ENST00000502493 354 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 AC139495.1-202ENST00000513164 354 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 AC026402.1-201ENST00000513642 170 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 Y_RNA.797-201ENST00000515977 94 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 MIR5688-201ENST00000580619 83 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 MIR4286-201ENST00000580651 93 ntBASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FOXD3Q9UJU5 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 RNU1-15P-201ENST00000353977 144 ntBASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 SNORD114-7-201ENST00000362520 77 ntBASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 SNORD32B-201ENST00000364460 84 ntBASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 Y_RNA.488-201ENST00000384403 102 ntBASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 AC004552.1-201ENST00000419089 348 ntBASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 EIF4EP4-201ENST00000424916 578 ntBASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 AL157831.1-201ENST00000426134 473 ntBASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 YME1L1P1-201ENST00000429435 297 ntBASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 RPS26P3-201ENST00000470205 348 ntBASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 AC090543.2-201ENST00000483963 348 ntBASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 AC004057.1-201ENST00000485827 348 ntBASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 SNORA70.14-201ENST00000516205 110 ntBASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 AC006064.5-201ENST00000541782 248 ntBASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 AC106785.1-201ENST00000565935 262 ntBASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 AC022655.2-201ENST00000577280 318 ntBASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXD3Q9UJU5 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 RNA5SP513-201ENST00000364648 118 ntBASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 Y_RNA.341-201ENST00000365341 102 ntBASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 U1.1-201ENST00000384101 164 ntBASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 MIR626-201ENST00000385032 94 ntBASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 MIR548B-201ENST00000385247 97 ntBASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 SNORA48.7-201ENST00000391302 135 ntBASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 RNU6-855P-201ENST00000410395 104 ntBASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 AL031183.1-201ENST00000457667 207 ntBASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 RN7SL691P-201ENST00000494487 301 ntBASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 RNA5SP49-201ENST00000516450 115 ntBASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 IGLV3-26-201ENST00000520756 302 ntBASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 AC021269.2-201ENST00000532318 330 ntBASIC3.8□□□□□ -1.8
FOXD3Q9UJU5 MIR4744-201ENST00000581563 82 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms