Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MTND1P30-201ENST00000441241 901 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AC073910.1-201ENST00000445047 438 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 SNORD4A-201ENST00000459174 72 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AC027338.1-201ENST00000514840 825 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 SNORA76.2-201ENST00000517095 137 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AC093012.1-202ENST00000549403 582 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AC112693.2-201ENST00000556538 232 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AC122134.1-202ENST00000569111 1201 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 MIR4764-201ENST00000580680 88 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AC007363.1-201ENST00000604736 620 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AL158211.4-201ENST00000606988 584 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AL355816.2-201ENST00000610049 647 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AC080188.3-201ENST00000624842 748 ntBASIC-0.42□□□□□ -2.48
SCN11AQ9UI33 AC107982.1-201ENST00000507171 1300 ntBASIC-0.43□□□□□ -2.48
SCN11AQ9UI33 RNU6-1339P-201ENST00000363574 91 ntBASIC-0.43□□□□□ -2.48
SCN11AQ9UI33 SNORD114-12-201ENST00000365400 75 ntBASIC-0.43□□□□□ -2.48
SCN11AQ9UI33 MIR892B-201ENST00000401279 77 ntBASIC-0.43□□□□□ -2.48
SCN11AQ9UI33 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.43□□□□□ -2.48
SCN11AQ9UI33 RPL23AP50-201ENST00000434149 455 ntBASIC-0.43□□□□□ -2.48
SCN11AQ9UI33 OARD1-209ENST00000471367 401 ntTSL 2 BASIC-0.43□□□□□ -2.48
SCN11AQ9UI33 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.43□□□□□ -2.48
SCN11AQ9UI33 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.43□□□□□ -2.48
SCN11AQ9UI33 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.43□□□□□ -2.48
SCN11AQ9UI33 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.43□□□□□ -2.48
SCN11AQ9UI33 AC079610.2-201ENST00000604818 690 ntBASIC-0.43□□□□□ -2.48
SCN11AQ9UI33 AC084824.4-201ENST00000620106 731 ntBASIC-0.43□□□□□ -2.48
SCN11AQ9UI33 AC092634.7-201ENST00000621022 103 ntBASIC-0.43□□□□□ -2.48
SCN11AQ9UI33 AC120349.3-201ENST00000624377 529 ntBASIC-0.43□□□□□ -2.48
SCN11AQ9UI33 AL590396.2-201ENST00000636511 1041 ntBASIC-0.43□□□□□ -2.48
SCN11AQ9UI33 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-0.44□□□□□ -2.48
SCN11AQ9UI33 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.44□□□□□ -2.48
SCN11AQ9UI33 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.44□□□□□ -2.48
SCN11AQ9UI33 MTCO3P29-201ENST00000432119 779 ntBASIC-0.44□□□□□ -2.48
SCN11AQ9UI33 RNFT1P2-201ENST00000443064 757 ntBASIC-0.44□□□□□ -2.48
SCN11AQ9UI33 SNORD57-201ENST00000448188 72 ntBASIC-0.44□□□□□ -2.48
SCN11AQ9UI33 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC-0.44□□□□□ -2.48
SCN11AQ9UI33 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.44□□□□□ -2.48
SCN11AQ9UI33 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.44□□□□□ -2.48
SCN11AQ9UI33 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.44□□□□□ -2.48
SCN11AQ9UI33 AL136317.1-201ENST00000612653 226 ntBASIC-0.44□□□□□ -2.48
SCN11AQ9UI33 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.44□□□□□ -2.48
SCN11AQ9UI33 RNA5SP128-201ENST00000365305 116 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 RNU6-331P-201ENST00000384724 107 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 MIR145-201ENST00000384967 88 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 AC105185.1-201ENST00000518705 535 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 SUMO2P18-201ENST00000518873 252 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 RNY1P9-201ENST00000532431 109 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 AC025449.1-201ENST00000603896 529 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 AL355598.1-201ENST00000604169 202 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 AC010133.1-201ENST00000615809 842 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 SNORD105-201ENST00000386910 85 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 MTCO1P19-201ENST00000443487 500 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 AC074198.2-201ENST00000508153 258 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 AC009646.1-201ENST00000510455 318 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 RNU6-840P-201ENST00000517275 65 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 IGKV1-22-201ENST00000524313 326 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 MIR3976-201ENST00000606807 139 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 AL031667.3-201ENST00000620124 655 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 MIR198-201ENST00000637333 62 ntBASIC-0.45□□□□□ -2.48
SCN11AQ9UI33 MIR103A2-201ENST00000362154 78 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 RNU4-63P-201ENST00000411313 118 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 AC068533.2-201ENST00000411872 306 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 ARL5AP1-201ENST00000418991 388 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 MTCYBP10-201ENST00000424905 650 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 MTATP6P16-201ENST00000434543 526 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 MTND3P4-201ENST00000453537 303 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 RPL39P39-201ENST00000455840 151 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 snoU13.21-201ENST00000459368 105 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 AC025465.4-201ENST00000513422 638 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 AC136618.2-201ENST00000575091 400 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 MIR4709-201ENST00000577272 72 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 AC098483.2-201ENST00000603158 454 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 AL358072.1-201ENST00000604156 575 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 AC011155.2-201ENST00000623202 216 ntBASIC-0.46□□□□□ -2.48
SCN11AQ9UI33 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.47□□□□□ -2.48
SCN11AQ9UI33 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.47□□□□□ -2.48
SCN11AQ9UI33 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-0.47□□□□□ -2.48
SCN11AQ9UI33 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.47□□□□□ -2.48
SCN11AQ9UI33 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.47□□□□□ -2.48
SCN11AQ9UI33 MTND1P15-201ENST00000579262 949 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms