Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL139247.1-201ENST00000422768 325 ntBASIC4.12□□□□□ -1.75
CNTN3Q9P232 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.12□□□□□ -1.75
CNTN3Q9P232 IFNA11P-201ENST00000446352 526 ntBASIC4.12□□□□□ -1.75
CNTN3Q9P232 SNORD19.2-201ENST00000516978 73 ntBASIC4.12□□□□□ -1.75
CNTN3Q9P232 MIR5187-201ENST00000583479 76 ntBASIC4.12□□□□□ -1.75
CNTN3Q9P232 HSPE1P7-201ENST00000604681 321 ntBASIC4.12□□□□□ -1.75
CNTN3Q9P232 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNTN3Q9P232 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNTN3Q9P232 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
CNTN3Q9P232 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNTN3Q9P232 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.11□□□□□ -1.75
CNTN3Q9P232 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNTN3Q9P232 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CNTN3Q9P232 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNTN3Q9P232 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.11□□□□□ -1.75
CNTN3Q9P232 SNORA62.3-201ENST00000365110 153 ntBASIC4.11□□□□□ -1.75
CNTN3Q9P232 Y_RNA.571-201ENST00000384753 98 ntBASIC4.11□□□□□ -1.75
CNTN3Q9P232 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CNTN3Q9P232 PTMAP2-201ENST00000397627 327 ntBASIC4.11□□□□□ -1.75
CNTN3Q9P232 AC009963.1-201ENST00000417265 157 ntBASIC4.11□□□□□ -1.75
CNTN3Q9P232 AC107626.1-201ENST00000471084 183 ntBASIC4.11□□□□□ -1.75
CNTN3Q9P232 RAC1P2-201ENST00000511164 579 ntBASIC4.11□□□□□ -1.75
CNTN3Q9P232 AC022695.1-201ENST00000522089 237 ntBASIC4.11□□□□□ -1.75
CNTN3Q9P232 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.11□□□□□ -1.75
CNTN3Q9P232 AC090877.1-201ENST00000561418 344 ntBASIC4.11□□□□□ -1.75
CNTN3Q9P232 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.11□□□□□ -1.75
CNTN3Q9P232 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.11□□□□□ -1.75
CNTN3Q9P232 AC020914.4-201ENST00000597690 277 ntBASIC4.11□□□□□ -1.75
CNTN3Q9P232 AC006380.1-201ENST00000603598 186 ntBASIC4.11□□□□□ -1.75
CNTN3Q9P232 AC024220.1-201ENST00000603675 484 ntBASIC4.11□□□□□ -1.75
CNTN3Q9P232 AL162713.1-201ENST00000604480 262 ntBASIC4.11□□□□□ -1.75
CNTN3Q9P232 RNU1-30P-201ENST00000606575 163 ntBASIC4.11□□□□□ -1.75
CNTN3Q9P232 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.11□□□□□ -1.75
CNTN3Q9P232 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.11□□□□□ -1.75
CNTN3Q9P232 AC092628.2-201ENST00000622492 339 ntBASIC4.11□□□□□ -1.75
CNTN3Q9P232 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CNTN3Q9P232 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CNTN3Q9P232 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNTN3Q9P232 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNTN3Q9P232 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNTN3Q9P232 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNTN3Q9P232 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.11□□□□□ -1.75
CNTN3Q9P232 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNTN3Q9P232 RNU6-1272P-201ENST00000362776 107 ntBASIC4.1□□□□□ -1.75
CNTN3Q9P232 RNU6-312P-201ENST00000364629 107 ntBASIC4.1□□□□□ -1.75
CNTN3Q9P232 AL359837.1-201ENST00000381357 287 ntBASIC4.1□□□□□ -1.75
CNTN3Q9P232 RNU6-1077P-201ENST00000410506 102 ntBASIC4.1□□□□□ -1.75
CNTN3Q9P232 AC017083.1-201ENST00000428093 483 ntBASIC4.1□□□□□ -1.75
CNTN3Q9P232 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.1□□□□□ -1.75
CNTN3Q9P232 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.1□□□□□ -1.75
CNTN3Q9P232 AC026726.1-201ENST00000512859 601 ntBASIC4.1□□□□□ -1.75
CNTN3Q9P232 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.1□□□□□ -1.75
CNTN3Q9P232 SNORA31.1-201ENST00000515993 133 ntBASIC4.1□□□□□ -1.75
CNTN3Q9P232 SNORA31.5-201ENST00000516190 133 ntBASIC4.1□□□□□ -1.75
CNTN3Q9P232 RNU6-966P-201ENST00000516479 104 ntBASIC4.1□□□□□ -1.75
CNTN3Q9P232 SNORA62.6-201ENST00000606322 83 ntBASIC4.1□□□□□ -1.75
CNTN3Q9P232 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CNTN3Q9P232 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CNTN3Q9P232 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CNTN3Q9P232 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CNTN3Q9P232 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.09□□□□□ -1.75
CNTN3Q9P232 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.09□□□□□ -1.75
CNTN3Q9P232 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CNTN3Q9P232 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
CNTN3Q9P232 Y_RNA.7-201ENST00000362352 102 ntBASIC4.09□□□□□ -1.75
CNTN3Q9P232 Y_RNA.272-201ENST00000364696 102 ntBASIC4.09□□□□□ -1.75
CNTN3Q9P232 RNU6-748P-201ENST00000384648 107 ntBASIC4.09□□□□□ -1.75
CNTN3Q9P232 RNA5SP38-201ENST00000410750 119 ntBASIC4.09□□□□□ -1.75
CNTN3Q9P232 PTGES3P4-201ENST00000426243 356 ntBASIC4.09□□□□□ -1.75
CNTN3Q9P232 AL441985.1-201ENST00000457727 251 ntBASIC4.09□□□□□ -1.75
CNTN3Q9P232 RNU5F-2P-201ENST00000516066 82 ntBASIC4.09□□□□□ -1.75
CNTN3Q9P232 MIR4429-201ENST00000580105 73 ntBASIC4.09□□□□□ -1.75
CNTN3Q9P232 MIR3145-201ENST00000580727 82 ntBASIC4.09□□□□□ -1.75
CNTN3Q9P232 AL137849.1-201ENST00000604767 169 ntBASIC4.09□□□□□ -1.75
CNTN3Q9P232 MIR486-1-201ENST00000612171 68 ntBASIC4.09□□□□□ -1.75
CNTN3Q9P232 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.09□□□□□ -1.75
CNTN3Q9P232 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.09□□□□□ -1.75
CNTN3Q9P232 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.09□□□□□ -1.75
CNTN3Q9P232 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CNTN3Q9P232 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.76
CNTN3Q9P232 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CNTN3Q9P232 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CNTN3Q9P232 Y_RNA.121-201ENST00000363309 113 ntBASIC4.08□□□□□ -1.76
CNTN3Q9P232 RNU6-1117P-201ENST00000384525 104 ntBASIC4.08□□□□□ -1.76
CNTN3Q9P232 RNU6-19P-201ENST00000384718 107 ntBASIC4.08□□□□□ -1.76
CNTN3Q9P232 CBX3P9-201ENST00000402326 552 ntBASIC4.08□□□□□ -1.76
CNTN3Q9P232 AC096649.2-201ENST00000416186 393 ntBASIC4.08□□□□□ -1.76
CNTN3Q9P232 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CNTN3Q9P232 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
CNTN3Q9P232 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.08□□□□□ -1.76
CNTN3Q9P232 AC005840.1-201ENST00000498412 377 ntBASIC4.08□□□□□ -1.76
CNTN3Q9P232 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.08□□□□□ -1.76
CNTN3Q9P232 HMGB3P3-201ENST00000510526 400 ntBASIC4.08□□□□□ -1.76
CNTN3Q9P232 RNU1-95P-201ENST00000516357 160 ntBASIC4.08□□□□□ -1.76
CNTN3Q9P232 RNU1-128P-201ENST00000516704 160 ntBASIC4.08□□□□□ -1.76
CNTN3Q9P232 AC009127.3-201ENST00000570531 403 ntBASIC4.08□□□□□ -1.76
CNTN3Q9P232 MIR4444-1-201ENST00000581696 74 ntBASIC4.08□□□□□ -1.76
CNTN3Q9P232 MIR4444-2-201ENST00000584390 74 ntBASIC4.08□□□□□ -1.76
CNTN3Q9P232 HMGN2P15-201ENST00000585707 270 ntBASIC4.08□□□□□ -1.76
CNTN3Q9P232 DEFB117-201ENST00000602356 141 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 215.3 ms