Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.75□□□□□ -2.53
CCDC180Q9P1Z9 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.75□□□□□ -2.53
CCDC180Q9P1Z9 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.75□□□□□ -2.53
CCDC180Q9P1Z9 AL391099.1-201ENST00000624635 187 ntBASIC-0.75□□□□□ -2.53
CCDC180Q9P1Z9 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.76□□□□□ -2.53
CCDC180Q9P1Z9 RNU6-177P-201ENST00000411257 104 ntBASIC-0.76□□□□□ -2.53
CCDC180Q9P1Z9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.76□□□□□ -2.53
CCDC180Q9P1Z9 ELOCP14-201ENST00000428070 331 ntBASIC-0.76□□□□□ -2.53
CCDC180Q9P1Z9 ELOCP7-201ENST00000439968 331 ntBASIC-0.76□□□□□ -2.53
CCDC180Q9P1Z9 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.76□□□□□ -2.53
CCDC180Q9P1Z9 RNU6-947P-201ENST00000516264 106 ntBASIC-0.76□□□□□ -2.53
CCDC180Q9P1Z9 MIR3681-201ENST00000580089 72 ntBASIC-0.76□□□□□ -2.53
CCDC180Q9P1Z9 AC004987.4-201ENST00000603383 338 ntBASIC-0.76□□□□□ -2.53
CCDC180Q9P1Z9 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.76□□□□□ -2.53
CCDC180Q9P1Z9 AL451064.1-201ENST00000607718 471 ntBASIC-0.76□□□□□ -2.53
CCDC180Q9P1Z9 MIR4275-201ENST00000636486 87 ntBASIC-0.76□□□□□ -2.53
CCDC180Q9P1Z9 SNORA63D-201ENST00000364359 132 ntBASIC-0.77□□□□□ -2.53
CCDC180Q9P1Z9 SNX3P1X-201ENST00000414887 175 ntBASIC-0.77□□□□□ -2.53
CCDC180Q9P1Z9 MTATP6P16-201ENST00000434543 526 ntBASIC-0.77□□□□□ -2.53
CCDC180Q9P1Z9 RNU7-56P-201ENST00000458744 62 ntBASIC-0.77□□□□□ -2.53
CCDC180Q9P1Z9 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.77□□□□□ -2.53
CCDC180Q9P1Z9 RNU6-703P-201ENST00000516946 107 ntBASIC-0.77□□□□□ -2.53
CCDC180Q9P1Z9 AL671309.1-201ENST00000603750 544 ntBASIC-0.77□□□□□ -2.53
CCDC180Q9P1Z9 HMGB1P51-201ENST00000605166 638 ntBASIC-0.77□□□□□ -2.53
CCDC180Q9P1Z9 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.77□□□□□ -2.53
CCDC180Q9P1Z9 AC116165.2-201ENST00000616705 206 ntBASIC-0.77□□□□□ -2.53
CCDC180Q9P1Z9 AC092634.7-201ENST00000621022 103 ntBASIC-0.77□□□□□ -2.53
CCDC180Q9P1Z9 AC119674.1-220ENST00000641502 1048 ntBASIC-0.77□□□□□ -2.53
CCDC180Q9P1Z9 RNY4P24-201ENST00000362735 96 ntBASIC-0.78□□□□□ -2.53
CCDC180Q9P1Z9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.78□□□□□ -2.53
CCDC180Q9P1Z9 SNORD116-13-201ENST00000384408 92 ntBASIC-0.78□□□□□ -2.53
CCDC180Q9P1Z9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.78□□□□□ -2.53
CCDC180Q9P1Z9 AC026782.1-201ENST00000512952 449 ntBASIC-0.78□□□□□ -2.53
CCDC180Q9P1Z9 AC018630.3-201ENST00000542637 96 ntBASIC-0.78□□□□□ -2.53
CCDC180Q9P1Z9 AL355297.3-201ENST00000604082 446 ntBASIC-0.78□□□□□ -2.53
CCDC180Q9P1Z9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.78□□□□□ -2.54
CCDC180Q9P1Z9 PPP1R11P2-201ENST00000423543 382 ntBASIC-0.78□□□□□ -2.54
CCDC180Q9P1Z9 MED13P1-201ENST00000428342 171 ntBASIC-0.78□□□□□ -2.54
CCDC180Q9P1Z9 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-0.78□□□□□ -2.54
CCDC180Q9P1Z9 ELOCP24-201ENST00000456370 334 ntBASIC-0.78□□□□□ -2.54
CCDC180Q9P1Z9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.78□□□□□ -2.54
CCDC180Q9P1Z9 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.78□□□□□ -2.54
CCDC180Q9P1Z9 AP001328.1-201ENST00000528550 176 ntBASIC-0.78□□□□□ -2.54
CCDC180Q9P1Z9 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.78□□□□□ -2.54
CCDC180Q9P1Z9 AC137800.2-201ENST00000574375 120 ntBASIC-0.78□□□□□ -2.54
CCDC180Q9P1Z9 RNA5SP300-201ENST00000391197 107 ntBASIC-0.79□□□□□ -2.54
CCDC180Q9P1Z9 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.79□□□□□ -2.54
CCDC180Q9P1Z9 AL139396.1-201ENST00000421137 167 ntBASIC-0.79□□□□□ -2.54
CCDC180Q9P1Z9 RPL23AP50-201ENST00000434149 455 ntBASIC-0.79□□□□□ -2.54
CCDC180Q9P1Z9 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.79□□□□□ -2.54
CCDC180Q9P1Z9 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.79□□□□□ -2.54
CCDC180Q9P1Z9 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.79□□□□□ -2.54
CCDC180Q9P1Z9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-0.79□□□□□ -2.54
CCDC180Q9P1Z9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.79□□□□□ -2.54
CCDC180Q9P1Z9 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC-0.79□□□□□ -2.54
CCDC180Q9P1Z9 MIR1248-201ENST00000629190 106 ntBASIC-0.79□□□□□ -2.54
CCDC180Q9P1Z9 U6.107-201ENST00000637108 79 ntBASIC-0.79□□□□□ -2.54
CCDC180Q9P1Z9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.8□□□□□ -2.54
CCDC180Q9P1Z9 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.8□□□□□ -2.54
CCDC180Q9P1Z9 MIR601-201ENST00000385256 79 ntBASIC-0.8□□□□□ -2.54
CCDC180Q9P1Z9 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.8□□□□□ -2.54
CCDC180Q9P1Z9 TAF13P2-201ENST00000416876 286 ntBASIC-0.8□□□□□ -2.54
CCDC180Q9P1Z9 AC073910.1-201ENST00000445047 438 ntBASIC-0.8□□□□□ -2.54
CCDC180Q9P1Z9 AC002381.1-201ENST00000447049 280 ntBASIC-0.8□□□□□ -2.54
CCDC180Q9P1Z9 ELOCP30-201ENST00000447108 299 ntBASIC-0.8□□□□□ -2.54
CCDC180Q9P1Z9 AC010376.1-201ENST00000522101 334 ntBASIC-0.8□□□□□ -2.54
CCDC180Q9P1Z9 AL590396.4-201ENST00000636779 956 ntBASIC-0.8□□□□□ -2.54
CCDC180Q9P1Z9 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.81□□□□□ -2.54
CCDC180Q9P1Z9 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.81□□□□□ -2.54
CCDC180Q9P1Z9 AC104332.1-201ENST00000440471 797 ntBASIC-0.81□□□□□ -2.54
CCDC180Q9P1Z9 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.81□□□□□ -2.54
CCDC180Q9P1Z9 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.81□□□□□ -2.54
CCDC180Q9P1Z9 AL157871.3-201ENST00000557231 293 ntBASIC-0.81□□□□□ -2.54
CCDC180Q9P1Z9 AC107952.2-201ENST00000606048 486 ntBASIC-0.81□□□□□ -2.54
CCDC180Q9P1Z9 AL159972.1-201ENST00000625150 448 ntBASIC-0.81□□□□□ -2.54
CCDC180Q9P1Z9 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 RPL7P55-201ENST00000450522 746 ntBASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 AC116655.1-201ENST00000508324 901 ntBASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 ACA59.2-201ENST00000517061 156 ntBASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 ELOCP9-201ENST00000418624 239 ntBASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 AC022364.2-201ENST00000457963 554 ntBASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 AC010460.2-201ENST00000509054 677 ntBASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 RNU1-117P-201ENST00000517041 158 ntBASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 AL136317.1-201ENST00000612653 226 ntBASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 AC104820.1-201ENST00000624183 307 ntBASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-0.82□□□□□ -2.54
CCDC180Q9P1Z9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.83□□□□□ -2.54
CCDC180Q9P1Z9 MIR892B-201ENST00000401279 77 ntBASIC-0.83□□□□□ -2.54
CCDC180Q9P1Z9 AL136310.1-201ENST00000404926 654 ntBASIC-0.83□□□□□ -2.54
CCDC180Q9P1Z9 AC002486.1-201ENST00000435098 391 ntBASIC-0.83□□□□□ -2.54
CCDC180Q9P1Z9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.83□□□□□ -2.54
CCDC180Q9P1Z9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.83□□□□□ -2.54
CCDC180Q9P1Z9 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms