Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.97□□□□□ -2.09
HMG20BQ9P0W2 RPL31P3-201ENST00000458430 332 ntBASIC1.97□□□□□ -2.09
HMG20BQ9P0W2 AL163973.1-201ENST00000484753 577 ntBASIC1.97□□□□□ -2.09
HMG20BQ9P0W2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
HMG20BQ9P0W2 MIR449C-201ENST00000516047 92 ntBASIC1.97□□□□□ -2.09
HMG20BQ9P0W2 Y_RNA.688-201ENST00000516565 95 ntBASIC1.97□□□□□ -2.09
HMG20BQ9P0W2 COPS8P3-201ENST00000526024 482 ntBASIC1.97□□□□□ -2.09
HMG20BQ9P0W2 VN1R107P-201ENST00000601784 209 ntBASIC1.97□□□□□ -2.09
HMG20BQ9P0W2 RN7SKP299-201ENST00000606679 301 ntBASIC1.97□□□□□ -2.09
HMG20BQ9P0W2 uc_338.34-201ENST00000617467 174 ntBASIC1.97□□□□□ -2.09
HMG20BQ9P0W2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 Y_RNA.1-201ENST00000352915 104 ntBASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 RNU6-142P-201ENST00000384019 107 ntBASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 RNU6-1103P-201ENST00000384150 107 ntBASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 SNORA12-201ENST00000391162 147 ntBASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 MIR1283-2-201ENST00000408621 87 ntBASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 RNU4-62P-201ENST00000410125 130 ntBASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 MTCO2P19-201ENST00000427513 598 ntBASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 AC073415.1-201ENST00000449240 153 ntBASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 RNU7-180P-201ENST00000459240 63 ntBASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 RNA5SP57-201ENST00000459463 123 ntBASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 MIR3122-201ENST00000577243 73 ntBASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 AC110760.3-201ENST00000598794 467 ntBASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 AL078605.1-201ENST00000603529 500 ntBASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 AC012507.3-201ENST00000603556 477 ntBASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 AP001596.2-201ENST00000608410 312 ntBASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 AL354685.2-201ENST00000448218 1447 ntBASIC1.96□□□□□ -2.1
HMG20BQ9P0W2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 RNU1-58P-201ENST00000362413 163 ntBASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 RNU6-1164P-201ENST00000364428 107 ntBASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 SNORA8-201ENST00000384574 139 ntBASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 MIR597-201ENST00000384968 97 ntBASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 SNORD37.1-201ENST00000390968 65 ntBASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 SNORA67.5-201ENST00000391036 107 ntBASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 CDK8P2-201ENST00000415020 547 ntBASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 AC078809.1-201ENST00000427601 140 ntBASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 VN1R108P-201ENST00000431580 830 ntBASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 AL121601.2-201ENST00000438019 707 ntBASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 RN7SKP210-201ENST00000459176 261 ntBASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 AC079140.3-201ENST00000511111 550 ntBASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMG20BQ9P0W2 AP000560.1-201ENST00000624150 1937 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 Y_RNA.255-201ENST00000364581 97 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 RNU6-1106P-201ENST00000390845 107 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 RNA5SP219-201ENST00000390940 113 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 RNU6-1158P-201ENST00000391167 107 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 RNA5SP212-201ENST00000391223 107 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 AL033519.2-201ENST00000403958 392 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 AL357139.1-201ENST00000407792 426 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 RN7SKP101-201ENST00000411376 320 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 AL606489.2-201ENST00000433886 234 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 HMGB1P29-201ENST00000505659 499 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 SNORA31.16-201ENST00000516773 139 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 RNU2-44P-201ENST00000516795 194 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 AP005639.2-201ENST00000527592 928 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 AC010620.1-201ENST00000601088 1102 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 CYP2C61P-201ENST00000604072 290 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 AL645939.4-201ENST00000604495 135 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 AL356157.2-201ENST00000605122 111 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 AC022079.1-201ENST00000621546 602 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HMG20BQ9P0W2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 Y_RNA.99-201ENST00000363138 105 ntBASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 SNORD32A-201ENST00000364805 84 ntBASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 Y_RNA.582-201ENST00000391023 95 ntBASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 RNU4-55P-201ENST00000410731 137 ntBASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 AL030996.1-201ENST00000411430 235 ntBASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 AL353193.1-201ENST00000421444 268 ntBASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 SNAP23P1-201ENST00000433229 246 ntBASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 AC132942.1-201ENST00000486753 483 ntBASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 HMGB3P17-201ENST00000504195 649 ntBASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.93□□□□□ -2.1
HMG20BQ9P0W2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms