Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 AC022695.1-201ENST00000522089 237 ntBASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 DEFB117-201ENST00000602356 141 ntBASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 AC011266.1-201ENST00000624119 3569 ntBASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 MFSD8-236ENST00000641509 4050 ntBASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 OTUD4P1-201ENST00000237841 3067 ntBASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 RNU6-324P-201ENST00000363957 106 ntBASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 Y_RNA.510-201ENST00000384511 114 ntBASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 RPL23AP48-201ENST00000406913 488 ntBASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 RNU6-1199P-201ENST00000411249 104 ntBASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 AL031183.1-201ENST00000457667 207 ntBASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 RN7SL807P-201ENST00000470923 297 ntBASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 RN7SL429P-201ENST00000479090 223 ntBASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 RN7SL489P-201ENST00000486185 223 ntBASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 RN7SL327P-201ENST00000488659 223 ntBASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 RN7SL853P-201ENST00000617250 223 ntBASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 AC068205.3-201ENST00000636385 468 ntBASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 AC058791.1-201ENST00000608412 3198 ntBASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
CXXC1Q9P0U4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 AC069528.2-201ENST00000624849 1991 ntBASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 AL157777.2-201ENST00000258070 137 ntBASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 Y_RNA.304-201ENST00000365011 112 ntBASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 RNU6-211P-201ENST00000384047 107 ntBASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 Y_RNA.435-201ENST00000384095 112 ntBASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 AC140059.1-201ENST00000489238 361 ntBASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 RNU1-117P-201ENST00000517041 158 ntBASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 AP002001.1-203ENST00000534002 267 ntBASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 AC008725.1-201ENST00000605123 2263 ntBASIC4.18□□□□□ -1.74
CXXC1Q9P0U4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 Y_RNA.240-201ENST00000364469 95 ntBASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 SNORA18.2-201ENST00000383865 132 ntBASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 RNU6-187P-201ENST00000384139 106 ntBASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 SNORA19-201ENST00000384737 128 ntBASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 ATP5A1P2-201ENST00000412323 255 ntBASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 RPL31P41-201ENST00000477967 372 ntBASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 RNY3P16-201ENST00000516338 101 ntBASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 RNU2-12P-201ENST00000517216 168 ntBASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 IGKV2-38-201ENST00000517443 247 ntBASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 AC079598.5-201ENST00000547460 117 ntBASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 AC009127.3-201ENST00000570531 403 ntBASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 AL670379.2-201ENST00000604983 252 ntBASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 AL365265.1-201ENST00000621045 234 ntBASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 snoU18.1-201ENST00000629629 71 ntBASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.17□□□□□ -1.74
CXXC1Q9P0U4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 RNU6-1272P-201ENST00000362776 107 ntBASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 Y_RNA.506-201ENST00000384494 102 ntBASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 BTF3P11-201ENST00000426582 477 ntBASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 AC008155.2-201ENST00000464337 397 ntBASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 AC091021.1-201ENST00000468051 388 ntBASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 HSPE1P18-201ENST00000517602 280 ntBASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 MIR5692C2-201ENST00000577959 77 ntBASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 AC012531.5-201ENST00000611375 151 ntBASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CXXC1Q9P0U4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CXXC1Q9P0U4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.15□□□□□ -1.74
CXXC1Q9P0U4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms