Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC037487.3-201ENST00000606668 112 ntBASIC4.28□□□□□ -1.72
ATG3Q9NT62 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.28□□□□□ -1.72
ATG3Q9NT62 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.28□□□□□ -1.72
ATG3Q9NT62 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG3Q9NT62 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG3Q9NT62 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATG3Q9NT62 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.73
ATG3Q9NT62 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATG3Q9NT62 DEFB108F-201ENST00000344638 222 ntBASIC4.27□□□□□ -1.73
ATG3Q9NT62 RNA5SP361-201ENST00000362686 118 ntBASIC4.27□□□□□ -1.73
ATG3Q9NT62 RNU6-44P-201ENST00000384045 107 ntBASIC4.27□□□□□ -1.73
ATG3Q9NT62 MIR10A-201ENST00000385043 110 ntBASIC4.27□□□□□ -1.73
ATG3Q9NT62 RPS4XP3-201ENST00000398541 413 ntBASIC4.27□□□□□ -1.73
ATG3Q9NT62 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.27□□□□□ -1.73
ATG3Q9NT62 OOSP1P1-201ENST00000423265 274 ntBASIC4.27□□□□□ -1.73
ATG3Q9NT62 RPL26P26-201ENST00000480251 434 ntBASIC4.27□□□□□ -1.73
ATG3Q9NT62 RNU7-110P-201ENST00000516891 62 ntBASIC4.27□□□□□ -1.73
ATG3Q9NT62 HIGD1AP1-201ENST00000550979 275 ntBASIC4.27□□□□□ -1.73
ATG3Q9NT62 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.27□□□□□ -1.73
ATG3Q9NT62 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.27□□□□□ -1.73
ATG3Q9NT62 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATG3Q9NT62 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
ATG3Q9NT62 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.27□□□□□ -1.73
ATG3Q9NT62 AL109809.4-201ENST00000603520 2185 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ATG3Q9NT62 RNU6-879P-201ENST00000364328 108 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 RNU6-336P-201ENST00000364891 107 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATG3Q9NT62 RNU6-17P-201ENST00000384245 107 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 RNU6-18P-201ENST00000384527 107 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.26□□□□□ -1.73
ATG3Q9NT62 AC009296.1-201ENST00000443146 155 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 UQCRBP2-201ENST00000447827 297 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 RPL23AP3-201ENST00000453844 468 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 AC073901.1-201ENST00000462471 408 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 AK6P2-201ENST00000549020 471 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG3Q9NT62 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.26□□□□□ -1.73
ATG3Q9NT62 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.26□□□□□ -1.73
ATG3Q9NT62 AC008749.1-201ENST00000597650 306 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 AC005828.6-201ENST00000606610 232 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 AC107294.1-201ENST00000609524 467 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 AL110115.1-201ENST00000614396 364 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 AC073349.3-201ENST00000617616 186 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 AC022149.2-201ENST00000621061 203 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 MTND1P7-201ENST00000632801 297 ntBASIC4.26□□□□□ -1.73
ATG3Q9NT62 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.26□□□□□ -1.73
ATG3Q9NT62 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG3Q9NT62 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.25□□□□□ -1.73
ATG3Q9NT62 RNU1-70P-201ENST00000362618 164 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 Y_RNA.261-201ENST00000364631 102 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 Y_RNA.343-201ENST00000365354 112 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG3Q9NT62 Y_RNA.400-201ENST00000383963 111 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 Y_RNA.488-201ENST00000384403 102 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 AC002075.2-201ENST00000425207 252 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 RPS15AP7-201ENST00000439294 405 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG3Q9NT62 AL357552.1-201ENST00000445254 415 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 MRPS10P1-201ENST00000448483 130 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 RN7SL863P-201ENST00000462370 296 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 HSPE1P6-201ENST00000479457 291 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 AL160314.1-201ENST00000490836 438 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 RPL23AP75-201ENST00000491601 451 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.25□□□□□ -1.73
ATG3Q9NT62 RNU5F-8P-201ENST00000515941 111 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 SNORA70.16-201ENST00000516390 95 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 RNU6-426P-201ENST00000516464 97 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.25□□□□□ -1.73
ATG3Q9NT62 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG3Q9NT62 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG3Q9NT62 AP002826.1-201ENST00000608835 315 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 RMST_8.1-201ENST00000610287 165 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 AC018692.3-201ENST00000623929 123 ntBASIC4.25□□□□□ -1.73
ATG3Q9NT62 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG3Q9NT62 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG3Q9NT62 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ATG3Q9NT62 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG3Q9NT62 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG3Q9NT62 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ATG3Q9NT62 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG3Q9NT62 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.25□□□□□ -1.73
ATG3Q9NT62 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.25□□□□□ -1.73
ATG3Q9NT62 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ATG3Q9NT62 AL035425.3-201ENST00000564206 4996 ntBASIC4.24□□□□□ -1.73
ATG3Q9NT62 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATG3Q9NT62 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
ATG3Q9NT62 MIR410-201ENST00000362222 80 ntBASIC4.24□□□□□ -1.73
ATG3Q9NT62 RNU4-9P-201ENST00000364951 139 ntBASIC4.24□□□□□ -1.73
ATG3Q9NT62 Y_RNA.353-201ENST00000365440 108 ntBASIC4.24□□□□□ -1.73
ATG3Q9NT62 RNU6-21P-201ENST00000384710 107 ntBASIC4.24□□□□□ -1.73
ATG3Q9NT62 SNORD12B-201ENST00000410433 91 ntBASIC4.24□□□□□ -1.73
ATG3Q9NT62 RNU5A-5P-201ENST00000411054 116 ntBASIC4.24□□□□□ -1.73
ATG3Q9NT62 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.24□□□□□ -1.73
ATG3Q9NT62 IFNA11P-201ENST00000446352 526 ntBASIC4.24□□□□□ -1.73
ATG3Q9NT62 RPL30P1-201ENST00000488676 339 ntBASIC4.24□□□□□ -1.73
ATG3Q9NT62 RNU1-61P-201ENST00000516107 151 ntBASIC4.24□□□□□ -1.73
ATG3Q9NT62 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.24□□□□□ -1.73
ATG3Q9NT62 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.24□□□□□ -1.73
ATG3Q9NT62 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms