Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 YWHAZP1-201ENST00000556286 722 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 MIR4513-201ENST00000581077 86 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 AL391994.1-201ENST00000254724 282 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-562P-201ENST00000362731 107 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 MIR92A1-201ENST00000385233 78 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 MIR300-201ENST00000401138 83 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 MIR1283-1-201ENST00000408494 87 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 RPS3AP1-201ENST00000413190 320 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AC119618.1-201ENST00000434191 222 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AL133217.1-201ENST00000450980 425 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 MTCO2P6-201ENST00000463134 685 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 FAM133DP-201ENST00000464802 691 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 COX6CP6-201ENST00000490840 228 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AC008628.2-201ENST00000502605 298 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AC016632.1-201ENST00000503994 196 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 ARL2BPP4-201ENST00000506854 471 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AC112206.4-201ENST00000515142 405 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 RNA5SP255-201ENST00000516370 107 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 MTND4LP18-201ENST00000526864 291 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AL513534.2-201ENST00000603836 250 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 Z99289.3-201ENST00000605586 594 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AC064807.4-201ENST00000607201 407 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AC104458.1-201ENST00000608243 463 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AP001596.2-201ENST00000608410 312 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AC138749.5-201ENST00000611461 208 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AC116165.2-201ENST00000616705 206 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AL031667.3-201ENST00000620124 655 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 U6.108-201ENST00000637764 58 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 AL445984.1-201ENST00000637834 659 ntBASIC0.36□□□□□ -2.35
CDC42SE1Q9NRR8 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-179P-201ENST00000363350 107 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 SNORA18.2-201ENST00000383865 132 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-1235P-201ENST00000384559 107 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-636P-201ENST00000384598 107 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 SNORD41-201ENST00000386967 70 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 ELOCP4-201ENST00000420090 333 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 AC010154.1-201ENST00000425857 269 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 AL031313.1-201ENST00000448435 256 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 EXOSC3P1-201ENST00000448649 500 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 MTCYBP1-201ENST00000454315 1119 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-498P-201ENST00000459468 107 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 AC087343.1-201ENST00000477341 475 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 BET1P1-201ENST00000482276 359 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 SCARNA24.1-201ENST00000516465 137 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 AC024995.1-201ENST00000523014 93 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 MIR4310-201ENST00000582950 57 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 AC022217.4-201ENST00000604389 163 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 FAM71BP1-201ENST00000604431 523 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 MIR6729-201ENST00000618194 65 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.35□□□□□ -2.35
CDC42SE1Q9NRR8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-715P-201ENST00000365204 103 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-116P-201ENST00000384042 109 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-975P-201ENST00000384296 105 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-550P-201ENST00000391057 101 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-482P-201ENST00000391068 107 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 RNA5SP467-201ENST00000391274 118 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 MIR208B-201ENST00000401172 77 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 TIMM9P3-201ENST00000428659 274 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 Z73417.1-201ENST00000447373 778 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC016717.1-201ENST00000448918 286 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 NDUFAF4P3-201ENST00000456468 525 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 UBL5P3-201ENST00000475112 231 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC098869.1-201ENST00000481627 292 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC093852.1-201ENST00000503587 266 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC105758.1-201ENST00000506038 399 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC116562.3-201ENST00000506136 177 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-567P-201ENST00000516746 107 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 RNU6-922P-201ENST00000516753 99 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC068587.5-201ENST00000528506 175 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC091544.4-201ENST00000555268 342 ntBASIC0.34□□□□□ -2.36
CDC42SE1Q9NRR8 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms