Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 RNU2-2P-201ENST00000410396 191 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 AP000275.1-201ENST00000411943 390 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 USP9YP18-201ENST00000425912 695 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 RPL23AP95-201ENST00000426806 265 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 IFNA20P-201ENST00000436840 528 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 SNORA59A-201ENST00000459326 152 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 RPL9P9-202ENST00000466501 579 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 AC092989.1-201ENST00000481235 277 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 AC022447.4-201ENST00000504053 364 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 RNU6-718P-201ENST00000516166 105 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 AC091544.4-201ENST00000555268 342 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 ZNF519P2-201ENST00000557032 169 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 AL078605.1-201ENST00000603529 500 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 AC018889.1-201ENST00000605372 397 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 U2.15-201ENST00000611544 191 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 U2.16-201ENST00000613119 191 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 U2.12-201ENST00000613778 191 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 U2.20-201ENST00000613956 192 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 U2.9-201ENST00000615427 191 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 U2.11-201ENST00000616345 191 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 U2.2-201ENST00000616535 191 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 U2.3-201ENST00000617785 191 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 U2.19-201ENST00000618602 191 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 RNU2-1-201ENST00000618664 191 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 U2.6-201ENST00000619225 191 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 U2.5-201ENST00000619465 191 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 U2.10-201ENST00000620268 191 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 AC098657.3-201ENST00000620434 263 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 SNORA43.4-201ENST00000629559 138 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 AC009541.1-201ENST00000438279 2662 ntBASIC1.8□□□□□ -2.12
EXOSC3Q9NQT5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 SNORD115-3-201ENST00000363100 82 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 RNU6-214P-201ENST00000384130 107 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 SUMO2P12-201ENST00000405924 140 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 SNORD23.1-201ENST00000408212 104 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 U3.40-201ENST00000408706 208 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 RN7SKP61-201ENST00000410642 295 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 RNU2-40P-201ENST00000410833 196 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 RNU6-325P-201ENST00000411132 105 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 AC078809.1-201ENST00000427601 140 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 AL133396.1-201ENST00000432048 687 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 GPM6BP3-201ENST00000442797 145 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 RPL32P28-201ENST00000443577 397 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 AC016632.1-201ENST00000503994 196 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 AC025465.4-201ENST00000513422 638 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 AC022616.8-201ENST00000533569 253 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 NDUFA5P6-201ENST00000542110 379 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 ANP32BP3-201ENST00000559213 706 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 MIR4648-201ENST00000580107 72 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 MIR4513-201ENST00000581077 86 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 MIR3136-201ENST00000583498 78 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 AL132822.1-201ENST00000617063 513 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 U4.5-201ENST00000617137 123 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 MIR1248-201ENST00000629190 106 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 AL450472.1-202ENST00000637286 180 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 CENPCP1-201ENST00000533085 2578 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 AC131280.1-202ENST00000624067 4211 ntBASIC1.79□□□□□ -2.12
EXOSC3Q9NQT5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 AP000560.1-201ENST00000624150 1937 ntBASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 SNORA16B-201ENST00000364674 135 ntBASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 RNU6-534P-201ENST00000364877 106 ntBASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 Y_RNA.295-201ENST00000364918 102 ntBASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 RNU6-877P-201ENST00000383868 107 ntBASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 RNU6-142P-201ENST00000384019 107 ntBASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 SNORA46.1-201ENST00000391069 153 ntBASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 BTF3L4P2-201ENST00000392798 346 ntBASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 AL355497.1-201ENST00000406262 551 ntBASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 NDUFA5P4-201ENST00000436704 385 ntBASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 RPS29P27-201ENST00000463711 170 ntBASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 MTCYBP18-201ENST00000501056 747 ntBASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 ANXA2P1-201ENST00000505539 926 ntBASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 SNORA31.25-201ENST00000517242 134 ntBASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.78□□□□□ -2.12
EXOSC3Q9NQT5 AC068790.6-201ENST00000602558 258 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms