Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AL356432.1-201ENST00000405809 419 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 RNU6-174P-201ENST00000410406 106 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 EIF4EP2-201ENST00000422816 654 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 ARL5AP4-201ENST00000430731 512 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 RPS12P2-201ENST00000439728 269 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 AC107399.1-201ENST00000451226 265 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 MTND4P17-201ENST00000470444 350 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 RPL23AP75-201ENST00000491601 451 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 AC026782.1-201ENST00000512952 449 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 MIR449C-201ENST00000516047 92 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 NDUFA5P6-201ENST00000542110 379 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 MIR5694-201ENST00000581190 76 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 AC009994.1-201ENST00000606889 253 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 AC245884.12-201ENST00000615364 59 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 AC233981.2-201ENST00000611524 1614 ntBASIC2.23□□□□□ -2.05
CHMP1AQ9HD42 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 U3.9-201ENST00000363823 204 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 SNORA18.3-201ENST00000384122 132 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 RNY3P14-201ENST00000384309 102 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 SNORA48.5-201ENST00000391143 135 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 RNA5SP494-201ENST00000410653 129 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 RNU4-14P-201ENST00000410858 122 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 IFNA11P-201ENST00000446352 526 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 AL353705.4-201ENST00000449661 238 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 RNU6-1016P-201ENST00000516689 94 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 HSPE1P18-201ENST00000517602 280 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 EIF4A1P12-201ENST00000551910 141 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 AL121579.1-201ENST00000555129 305 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 AC109446.1-201ENST00000566172 220 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 MIR5696-201ENST00000578474 85 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 MIR1254-2-201ENST00000579553 63 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 MIR3944-201ENST00000581277 108 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 BNIP3P22-201ENST00000593399 556 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 AC011494.1-201ENST00000596454 237 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 AC018462.2-201ENST00000605375 395 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 AL137847.3-201ENST00000611521 109 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 MIR6840-201ENST00000611937 71 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.22□□□□□ -2.05
CHMP1AQ9HD42 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 MIR1294-201ENST00000408503 142 ntBASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 RPL37P10-201ENST00000412884 288 ntBASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 AL358453.1-201ENST00000422522 250 ntBASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 AC087477.1-201ENST00000465747 340 ntBASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 AC009127.3-201ENST00000570531 403 ntBASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 MIR548S-201ENST00000581352 82 ntBASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 MIR4444-1-201ENST00000581696 74 ntBASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 MIR4444-2-201ENST00000584390 74 ntBASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 UBE2V2P2-201ENST00000587677 504 ntBASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 AC010928.2-201ENST00000588017 287 ntBASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 AL158827.2-201ENST00000602494 330 ntBASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 MIR8057-201ENST00000620957 69 ntBASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 AL691447.3-201ENST00000635020 330 ntBASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 MTND5P9-201ENST00000503854 1755 ntBASIC2.21□□□□□ -2.06
CHMP1AQ9HD42 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 AL596028.1-201ENST00000326971 197 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 RNU1-91P-201ENST00000364746 163 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 RNU6-611P-201ENST00000384276 104 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 RNU6-601P-201ENST00000384540 107 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 Y_RNA.533-201ENST00000384596 114 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 MIR23B-201ENST00000384832 97 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 MIR524-201ENST00000385242 87 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 RNU6-1093P-201ENST00000391194 107 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 Y_RNA.594-201ENST00000410373 140 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 RNA5SP21-201ENST00000410917 96 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 EDDM3CP-201ENST00000415977 425 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 AL139132.1-201ENST00000431587 344 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 Z82188.1-201ENST00000436709 154 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 AC091951.2-201ENST00000500762 203 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 ANXA2P1-201ENST00000505539 926 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 Y_RNA.670-201ENST00000516255 105 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 MIR5092-201ENST00000583139 88 ntBASIC2.2□□□□□ -2.06
CHMP1AQ9HD42 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms