Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AMD1P1-201ENST00000457220 922 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.18□□□□□ -2.06
SNX25Q9H3E2 RPS27P21-201ENST00000486977 252 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 AC008628.2-201ENST00000502605 298 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.18□□□□□ -2.06
SNX25Q9H3E2 AC022447.4-201ENST00000504053 364 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 SNORA31.16-201ENST00000516773 139 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.18□□□□□ -2.06
SNX25Q9H3E2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.18□□□□□ -2.06
SNX25Q9H3E2 HSPE1P4-201ENST00000550617 308 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 SCOCP1-201ENST00000554676 349 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 AC233702.2-202ENST00000562547 291 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 MIR5002-201ENST00000584713 97 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.18□□□□□ -2.06
SNX25Q9H3E2 AL078605.1-201ENST00000603529 500 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 AC090617.10-201ENST00000624308 134 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 SNORA43.4-201ENST00000629559 138 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 AC027514.1-201ENST00000588561 1603 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SNX25Q9H3E2 RNU6-1252P-201ENST00000363054 104 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 RNU6-877P-201ENST00000383868 107 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 Y_RNA.573-201ENST00000384763 105 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 MIR29B2-201ENST00000385055 81 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 U3.40-201ENST00000408706 208 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 RN7SKP158-201ENST00000410453 326 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 Y_RNA.599-201ENST00000410489 109 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 RNU6-1148P-201ENST00000410992 104 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 RNU6-373P-201ENST00000411247 98 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 FCF1P9-201ENST00000412546 282 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 EIF1P1-201ENST00000421436 341 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.17□□□□□ -2.06
SNX25Q9H3E2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.17□□□□□ -2.06
SNX25Q9H3E2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.17□□□□□ -2.06
SNX25Q9H3E2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.17□□□□□ -2.06
SNX25Q9H3E2 AC082651.2-201ENST00000496833 166 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.17□□□□□ -2.06
SNX25Q9H3E2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.17□□□□□ -2.06
SNX25Q9H3E2 AC025465.4-201ENST00000513422 638 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 RNU1-40P-201ENST00000516816 164 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 RNU1-97P-201ENST00000516872 164 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 RNU6-612P-201ENST00000516909 102 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 AC018630.3-201ENST00000542637 96 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.17□□□□□ -2.06
SNX25Q9H3E2 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.17□□□□□ -2.06
SNX25Q9H3E2 RPS3AP23-202ENST00000574601 686 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 CPDP1-201ENST00000579660 283 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 AL034555.1-201ENST00000604816 211 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 AC063943.3-201ENST00000615562 356 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 AC007014.2-201ENST00000615581 479 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 SNORD98-201ENST00000636377 67 ntBASIC2.17□□□□□ -2.06
SNX25Q9H3E2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.16□□□□□ -2.06
SNX25Q9H3E2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SNX25Q9H3E2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SNX25Q9H3E2 SNORD114-1-201ENST00000362705 72 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 RNU6-142P-201ENST00000384019 107 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 RNU6-214P-201ENST00000384130 107 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 Y_RNA.530-201ENST00000384587 101 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 RNU6-1106P-201ENST00000390845 107 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SNX25Q9H3E2 AL079342.1-201ENST00000401460 267 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 RN7SKP284-201ENST00000411002 343 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 AL139156.1-201ENST00000412785 841 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.16□□□□□ -2.06
SNX25Q9H3E2 VN1R36P-201ENST00000414936 291 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 AL590135.1-201ENST00000422215 156 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 AC019205.3-201ENST00000424573 156 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 UBE2V1P4-201ENST00000425374 344 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 AL513185.2-201ENST00000425543 193 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 USP9YP28-201ENST00000435142 589 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.16□□□□□ -2.06
SNX25Q9H3E2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.16□□□□□ -2.06
SNX25Q9H3E2 AC016700.2-201ENST00000446011 156 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 RPL9P9-202ENST00000466501 579 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 AC015911.1-201ENST00000495111 156 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.16□□□□□ -2.06
SNX25Q9H3E2 AC118273.2-201ENST00000532092 465 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.16□□□□□ -2.06
SNX25Q9H3E2 AC022202.1-201ENST00000613515 211 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 AL132822.1-201ENST00000617063 513 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 MIR3662-201ENST00000637030 95 ntBASIC2.16□□□□□ -2.06
SNX25Q9H3E2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
SNX25Q9H3E2 SNORD113-7-201ENST00000363762 77 ntBASIC2.15□□□□□ -2.07
SNX25Q9H3E2 RNU6-1317P-201ENST00000364582 104 ntBASIC2.15□□□□□ -2.07
SNX25Q9H3E2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SNX25Q9H3E2 Y_RNA.597-201ENST00000410463 100 ntBASIC2.15□□□□□ -2.07
SNX25Q9H3E2 RNU2-32P-201ENST00000411193 191 ntBASIC2.15□□□□□ -2.07
SNX25Q9H3E2 IFNA20P-201ENST00000436840 528 ntBASIC2.15□□□□□ -2.07
SNX25Q9H3E2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.15□□□□□ -2.07
SNX25Q9H3E2 AC007547.1-201ENST00000462177 490 ntBASIC2.15□□□□□ -2.07
SNX25Q9H3E2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.15□□□□□ -2.07
SNX25Q9H3E2 YWHAEP4-201ENST00000505390 198 ntBASIC2.15□□□□□ -2.07
SNX25Q9H3E2 SNORA4.4-201ENST00000515921 135 ntBASIC2.15□□□□□ -2.07
SNX25Q9H3E2 AC034114.1-201ENST00000520293 285 ntBASIC2.15□□□□□ -2.07
SNX25Q9H3E2 NDUFA5P6-201ENST00000542110 379 ntBASIC2.15□□□□□ -2.07
SNX25Q9H3E2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.15□□□□□ -2.07
SNX25Q9H3E2 MIR3136-201ENST00000583498 78 ntBASIC2.15□□□□□ -2.07
SNX25Q9H3E2 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.15□□□□□ -2.07
SNX25Q9H3E2 MIR3672-201ENST00000584290 82 ntBASIC2.15□□□□□ -2.07
SNX25Q9H3E2 AC002984.1-201ENST00000591692 448 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 195 ms