Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
ZNF541Q9H0D2 RNU6-522P-201ENST00000364497 107 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 RNU6-1329P-201ENST00000365664 107 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 RNU6-1013P-201ENST00000384180 107 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 MTND4LP16-201ENST00000440828 295 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 RNU7-26P-201ENST00000458980 63 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 RPS29P25-201ENST00000481709 171 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 TRBVA-201ENST00000498804 316 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 SNORA31.15-201ENST00000516771 132 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 COPS8P3-201ENST00000526024 482 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 AC023824.2-201ENST00000566185 400 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 MIR5194-201ENST00000582634 120 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 BNIP3P16-201ENST00000589779 534 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 SNRPGP19-201ENST00000603826 189 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 CTHRC1P1-201ENST00000605383 469 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 AC064836.2-201ENST00000609491 462 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 AC090617.10-201ENST00000624308 134 ntBASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
ZNF541Q9H0D2 Y_RNA.86-201ENST00000363020 111 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 SNORA25.9-201ENST00000365087 128 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 RNA5SP240-201ENST00000365355 128 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 RNU1-138P-201ENST00000384093 164 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 U8.10-201ENST00000384260 133 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 RNU6-692P-201ENST00000384496 107 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 BTF3L4P2-201ENST00000392798 346 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 VN1R36P-201ENST00000414936 291 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AL117339.3-201ENST00000418733 162 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AL445685.2-201ENST00000422551 342 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AL590556.1-201ENST00000423231 483 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 USP9YP28-201ENST00000435142 589 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AC007969.2-201ENST00000441891 191 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AC013470.1-201ENST00000453438 462 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 U8.21-201ENST00000459536 136 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AP000852.1-201ENST00000472460 573 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AC092436.3-201ENST00000511788 257 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AC025465.4-201ENST00000513422 638 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AF235103.2-201ENST00000525753 346 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AP005597.4-201ENST00000526762 229 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AP000889.2-201ENST00000532684 490 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 BNIP3P25-201ENST00000596023 559 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AC009314.1-201ENST00000603871 304 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AL359821.1-201ENST00000605519 182 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AC008121.3-201ENST00000618726 433 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 ZNF271P-202ENST00000465539 1970 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 Y_RNA.248-201ENST00000364501 109 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 RNU6-128P-201ENST00000383976 107 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 RNU4-62P-201ENST00000410125 130 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 CYCSP48-201ENST00000417124 323 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 UBE2V1P4-201ENST00000425374 344 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 FGF7P6-202ENST00000451282 293 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AMD1P1-201ENST00000457220 922 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AC090096.1-201ENST00000489168 390 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 RN7SKP256-201ENST00000517201 314 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AC115990.1-201ENST00000526957 301 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 HSPE1P4-201ENST00000550617 308 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 ELOCP5-201ENST00000604924 333 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 AC068944.2-201ENST00000610373 403 ntBASIC2.42□□□□□ -2.02
ZNF541Q9H0D2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 Y_RNA.122-201ENST00000363331 96 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 RNU6-1210P-201ENST00000363775 107 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 RNU4-56P-201ENST00000364700 142 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 Y_RNA.414-201ENST00000384011 101 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 RNU6-1032P-201ENST00000384100 107 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 RNU6-790P-201ENST00000384479 105 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 AL161788.1-201ENST00000441805 169 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 RPL31P58-201ENST00000469001 379 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 AC069439.1-201ENST00000494739 167 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 AC018710.1-201ENST00000506509 158 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 AC096745.1-201ENST00000509945 370 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 FAM206BP-201ENST00000510179 541 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 AF213884.2-201ENST00000510417 903 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 RPL39P5-202ENST00000512505 151 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 RNU6-256P-201ENST00000516747 97 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 RNU6-1314P-201ENST00000517139 104 ntBASIC2.41□□□□□ -2.02
ZNF541Q9H0D2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms