Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MIR3146-201ENST00000580367 79 ntBASIC0.69□□□□□ -2.3
TRIM4Q9C037 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.69□□□□□ -2.3
TRIM4Q9C037 BCRP9-201ENST00000605312 388 ntBASIC0.69□□□□□ -2.3
TRIM4Q9C037 AC018889.1-201ENST00000605372 397 ntBASIC0.69□□□□□ -2.3
TRIM4Q9C037 AC009229.3-201ENST00000608056 282 ntBASIC0.69□□□□□ -2.3
TRIM4Q9C037 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.69□□□□□ -2.3
TRIM4Q9C037 AC073544.1-201ENST00000600110 1595 ntBASIC0.69□□□□□ -2.3
TRIM4Q9C037 AL589743.1-201ENST00000551932 2712 ntBASIC0.68□□□□□ -2.3
TRIM4Q9C037 RNU6-222P-201ENST00000362438 107 ntBASIC0.68□□□□□ -2.3
TRIM4Q9C037 RNU6-384P-201ENST00000364900 104 ntBASIC0.68□□□□□ -2.3
TRIM4Q9C037 RNU6-769P-201ENST00000384407 104 ntBASIC0.68□□□□□ -2.3
TRIM4Q9C037 RNU6-1176P-201ENST00000390955 107 ntBASIC0.68□□□□□ -2.3
TRIM4Q9C037 RNU6-733P-201ENST00000410759 104 ntBASIC0.68□□□□□ -2.3
TRIM4Q9C037 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.68□□□□□ -2.3
TRIM4Q9C037 BTBD7P2-201ENST00000441962 620 ntBASIC0.68□□□□□ -2.3
TRIM4Q9C037 AC145146.1-201ENST00000496370 254 ntBASIC0.68□□□□□ -2.3
TRIM4Q9C037 MTCO3P9-201ENST00000506989 781 ntBASIC0.68□□□□□ -2.3
TRIM4Q9C037 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.68□□□□□ -2.3
TRIM4Q9C037 AC109445.1-201ENST00000512356 383 ntBASIC0.68□□□□□ -2.3
TRIM4Q9C037 MTCO3P28-201ENST00000513351 515 ntBASIC0.68□□□□□ -2.3
TRIM4Q9C037 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.68□□□□□ -2.3
TRIM4Q9C037 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.68□□□□□ -2.3
TRIM4Q9C037 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.68□□□□□ -2.3
TRIM4Q9C037 U6.42-201ENST00000618440 107 ntBASIC0.68□□□□□ -2.3
TRIM4Q9C037 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.68□□□□□ -2.3
TRIM4Q9C037 Y_RNA.192-201ENST00000363977 102 ntBASIC0.67□□□□□ -2.3
TRIM4Q9C037 AC010099.3-201ENST00000423896 409 ntBASIC0.67□□□□□ -2.3
TRIM4Q9C037 RPL23AP30-201ENST00000432419 501 ntBASIC0.67□□□□□ -2.3
TRIM4Q9C037 AL008629.1-201ENST00000438615 184 ntBASIC0.67□□□□□ -2.3
TRIM4Q9C037 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.67□□□□□ -2.3
TRIM4Q9C037 snoU13.27-201ENST00000459278 104 ntBASIC0.67□□□□□ -2.3
TRIM4Q9C037 RNU6-322P-201ENST00000516010 103 ntBASIC0.67□□□□□ -2.3
TRIM4Q9C037 RNU6-229P-201ENST00000516614 102 ntBASIC0.67□□□□□ -2.3
TRIM4Q9C037 APOOP3-201ENST00000536787 586 ntBASIC0.67□□□□□ -2.3
TRIM4Q9C037 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.67□□□□□ -2.3
TRIM4Q9C037 AC009712.1-201ENST00000564938 316 ntBASIC0.67□□□□□ -2.3
TRIM4Q9C037 MIR544B-201ENST00000582372 78 ntBASIC0.67□□□□□ -2.3
TRIM4Q9C037 SNORA12.2-201ENST00000391040 156 ntBASIC0.66□□□□□ -2.3
TRIM4Q9C037 RNU2-62P-201ENST00000410868 191 ntBASIC0.66□□□□□ -2.3
TRIM4Q9C037 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.66□□□□□ -2.3
TRIM4Q9C037 RNU6-496P-201ENST00000516145 99 ntBASIC0.66□□□□□ -2.3
TRIM4Q9C037 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.66□□□□□ -2.3
TRIM4Q9C037 DEFB131E-202ENST00000602581 683 ntBASIC0.66□□□□□ -2.3
TRIM4Q9C037 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.66□□□□□ -2.3
TRIM4Q9C037 AC040896.1-201ENST00000613819 479 ntBASIC0.66□□□□□ -2.3
TRIM4Q9C037 AC091948.2-201ENST00000636510 279 ntBASIC0.66□□□□□ -2.3
TRIM4Q9C037 AL159152.1-201ENST00000635019 2587 ntBASIC0.66□□□□□ -2.3
TRIM4Q9C037 RNU6-960P-201ENST00000364056 120 ntBASIC0.65□□□□□ -2.31
TRIM4Q9C037 MIR544A-201ENST00000384855 91 ntBASIC0.65□□□□□ -2.31
TRIM4Q9C037 RNU4-22P-201ENST00000411058 166 ntBASIC0.65□□□□□ -2.31
TRIM4Q9C037 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.65□□□□□ -2.31
TRIM4Q9C037 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.65□□□□□ -2.31
TRIM4Q9C037 MTND4P20-201ENST00000424125 869 ntBASIC0.65□□□□□ -2.31
TRIM4Q9C037 RPS20P10-201ENST00000451209 253 ntBASIC0.65□□□□□ -2.31
TRIM4Q9C037 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.65□□□□□ -2.31
TRIM4Q9C037 AC074344.1-201ENST00000512823 224 ntBASIC0.65□□□□□ -2.31
TRIM4Q9C037 AC136628.3-201ENST00000521868 290 ntBASIC0.65□□□□□ -2.31
TRIM4Q9C037 AC107304.1-201ENST00000604229 296 ntBASIC0.65□□□□□ -2.31
TRIM4Q9C037 AL034555.1-201ENST00000604816 211 ntBASIC0.65□□□□□ -2.31
TRIM4Q9C037 AC091965.4-201ENST00000607691 587 ntBASIC0.65□□□□□ -2.31
TRIM4Q9C037 AC104073.3-201ENST00000610942 955 ntBASIC0.65□□□□□ -2.31
TRIM4Q9C037 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.65□□□□□ -2.31
TRIM4Q9C037 AC131159.1-201ENST00000621854 213 ntBASIC0.65□□□□□ -2.31
TRIM4Q9C037 RMST_7.1-201ENST00000621935 268 ntBASIC0.65□□□□□ -2.31
TRIM4Q9C037 RNU1-96P-201ENST00000364163 162 ntBASIC0.64□□□□□ -2.31
TRIM4Q9C037 RNU6-438P-201ENST00000365561 103 ntBASIC0.64□□□□□ -2.31
TRIM4Q9C037 RNU6-1179P-201ENST00000384667 107 ntBASIC0.64□□□□□ -2.31
TRIM4Q9C037 MIR19B1-201ENST00000384829 87 ntBASIC0.64□□□□□ -2.31
TRIM4Q9C037 ARL5AP1-201ENST00000418991 388 ntBASIC0.64□□□□□ -2.31
TRIM4Q9C037 RNA5SP285-201ENST00000516619 119 ntBASIC0.64□□□□□ -2.31
TRIM4Q9C037 RNU6-197P-201ENST00000516680 100 ntBASIC0.64□□□□□ -2.31
TRIM4Q9C037 SNORA70.22-201ENST00000517160 124 ntBASIC0.64□□□□□ -2.31
TRIM4Q9C037 RNU6-165P-201ENST00000517170 99 ntBASIC0.64□□□□□ -2.31
TRIM4Q9C037 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.64□□□□□ -2.31
TRIM4Q9C037 MIR548AC-201ENST00000585049 88 ntBASIC0.64□□□□□ -2.31
TRIM4Q9C037 AL512605.2-201ENST00000592972 256 ntBASIC0.64□□□□□ -2.31
TRIM4Q9C037 AC096720.1-201ENST00000604441 183 ntBASIC0.64□□□□□ -2.31
TRIM4Q9C037 AC108747.1-201ENST00000609508 535 ntBASIC0.64□□□□□ -2.31
TRIM4Q9C037 uc_338.17-201ENST00000619633 179 ntBASIC0.64□□□□□ -2.31
TRIM4Q9C037 MIR5087-201ENST00000635826 76 ntBASIC0.64□□□□□ -2.31
TRIM4Q9C037 Y_RNA.60-201ENST00000362831 98 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 RNU6-78P-201ENST00000362897 107 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 Y_RNA.390-201ENST00000383932 102 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 SNORA32.2-201ENST00000384049 122 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 MIR578-201ENST00000384828 96 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 RNA5SP511-201ENST00000410487 115 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 AC114482.1-201ENST00000418010 247 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.63□□□□□ -2.31
TRIM4Q9C037 MTCO3P29-201ENST00000432119 779 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.63□□□□□ -2.31
TRIM4Q9C037 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.63□□□□□ -2.31
TRIM4Q9C037 RPS26P45-201ENST00000471748 340 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 AK3P2-201ENST00000507976 429 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 MTND3P5-201ENST00000512798 333 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 AC115990.1-201ENST00000526957 301 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 AL442163.3-201ENST00000554110 156 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 SNORA59B-202ENST00000578183 701 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 MIR4514-201ENST00000581410 57 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 AC072039.2-201ENST00000608883 439 ntBASIC0.63□□□□□ -2.31
TRIM4Q9C037 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms