Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AP001836.1-201ENST00000604675 523 ntBASIC2.06□□□□□ -2.08
CCDC28BQ9BUN5 AC135507.2-201ENST00000612443 309 ntBASIC2.06□□□□□ -2.08
CCDC28BQ9BUN5 AC005858.4-201ENST00000623191 700 ntBASIC2.06□□□□□ -2.08
CCDC28BQ9BUN5 AC097372.5-201ENST00000623665 376 ntBASIC2.06□□□□□ -2.08
CCDC28BQ9BUN5 TPTEP1-208ENST00000636884 213 ntBASIC2.06□□□□□ -2.08
CCDC28BQ9BUN5 MTND4P12-201ENST00000498999 1377 ntBASIC2.06□□□□□ -2.08
CCDC28BQ9BUN5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC28BQ9BUN5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 Z75746.1-201ENST00000440243 2080 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 RNU6-227P-201ENST00000362865 103 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 Y_RNA.142-201ENST00000363491 102 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 Y_RNA.184-201ENST00000363884 108 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 RNU6-1317P-201ENST00000364582 104 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 Y_RNA.339-201ENST00000365325 102 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 RNU1-57P-201ENST00000384491 166 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 MIR544A-201ENST00000384855 91 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 MIR17-201ENST00000385012 84 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 RNU6-1009P-201ENST00000390996 107 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AL133475.1-201ENST00000404414 305 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AL356432.1-201ENST00000405809 419 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 U6atac.2-201ENST00000408644 118 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 RN7SKP158-201ENST00000410453 326 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 RNU6-1328P-201ENST00000410938 106 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AC074085.1-201ENST00000413598 418 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AC009963.1-201ENST00000417265 157 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 BX276092.3-201ENST00000424182 230 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AL590632.1-201ENST00000424289 371 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 RPL39P29-201ENST00000447779 157 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AC107399.1-201ENST00000451226 265 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 PCMTD1P1-201ENST00000455560 355 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 RNU7-187P-201ENST00000458985 68 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AC112771.1-201ENST00000463581 102 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AC091951.2-201ENST00000500762 203 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 MTND5P5-201ENST00000503764 376 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AC103851.1-201ENST00000506833 274 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 RNU2-44P-201ENST00000516795 194 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 RNU6-273P-201ENST00000516937 96 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 SCARNA3-201ENST00000517097 143 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AP005902.1-201ENST00000521358 186 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AC091135.1-201ENST00000585943 307 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AC073410.2-201ENST00000603240 332 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AC018889.1-201ENST00000605372 397 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AL161423.1-201ENST00000613700 262 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AC104260.1-201ENST00000616660 539 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AL159153.1-201ENST00000619688 317 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 AP000560.1-201ENST00000624150 1937 ntBASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
CCDC28BQ9BUN5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 RNU6-529P-201ENST00000363383 104 ntBASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 RNU6-692P-201ENST00000384496 107 ntBASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 RPL23AP95-201ENST00000426806 265 ntBASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 AC078809.1-201ENST00000427601 140 ntBASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 AC025750.2-201ENST00000442609 450 ntBASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 AC080013.2-201ENST00000460866 323 ntBASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 RPS29P27-201ENST00000463711 170 ntBASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 FGF7P4-201ENST00000509595 295 ntBASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 RNA5SP281-201ENST00000516504 135 ntBASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 AC078795.3-201ENST00000602913 472 ntBASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 LARP7P1-201ENST00000605576 316 ntBASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 AC124303.1-201ENST00000605703 360 ntBASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 MIR8076-201ENST00000611401 83 ntBASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 MIR7106-201ENST00000612419 65 ntBASIC2.04□□□□□ -2.08
CCDC28BQ9BUN5 AC080128.1-201ENST00000474389 1917 ntBASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 RNU6-1285P-201ENST00000363480 105 ntBASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 Y_RNA.263-201ENST00000364659 114 ntBASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 SNORD32A-201ENST00000364805 84 ntBASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 RNU6-43P-201ENST00000384302 107 ntBASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 BTF3L4P2-201ENST00000392798 346 ntBASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 RN7SKP61-201ENST00000410642 295 ntBASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 EIF4EP4-201ENST00000424916 578 ntBASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 RPL23AP83-201ENST00000434984 473 ntBASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 AC096576.1-201ENST00000489014 359 ntBASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 AC023141.11-201ENST00000508864 202 ntBASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 AC116337.1-201ENST00000509680 687 ntBASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 PTP4A1P4-201ENST00000512479 322 ntBASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 RNU1-54P-201ENST00000517181 120 ntBASIC2.03□□□□□ -2.08
CCDC28BQ9BUN5 AC105029.1-201ENST00000520250 669 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms