Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC105245.1-201ENST00000581934 244 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 Z98751.3-201ENST00000604447 521 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 AC137590.2-201ENST00000619709 240 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPAS1Q99742 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.67□□□□□ -1.98
NPAS1Q99742 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
NPAS1Q99742 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NPAS1Q99742 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NPAS1Q99742 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.67□□□□□ -1.98
NPAS1Q99742 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPAS1Q99742 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPAS1Q99742 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
NPAS1Q99742 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.67□□□□□ -1.98
NPAS1Q99742 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NPAS1Q99742 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
NPAS1Q99742 RNU4-76P-201ENST00000364509 141 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 Y_RNA.394-201ENST00000383942 103 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 RNU6-1032P-201ENST00000384100 107 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 U6atac.2-201ENST00000408644 118 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 RNU6-1156P-201ENST00000410365 100 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 Y_RNA.605-201ENST00000410577 105 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 AL139132.1-201ENST00000431587 344 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 MTCO3P29-201ENST00000432119 779 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 Z82188.1-201ENST00000436709 154 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.66□□□□□ -1.98
NPAS1Q99742 AC090515.1-201ENST00000465295 476 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 RNU6-976P-201ENST00000516086 111 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 RN7SKP43-201ENST00000516173 320 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 SNORD116.3-201ENST00000517176 78 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.66□□□□□ -1.98
NPAS1Q99742 AP002404.1-201ENST00000532005 451 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 AC022080.3-201ENST00000544433 482 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.66□□□□□ -1.98
NPAS1Q99742 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.66□□□□□ -1.98
NPAS1Q99742 AC004584.2-201ENST00000570407 410 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 MIR5571-201ENST00000577998 113 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 AL033523.1-201ENST00000605153 153 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 RPL23AP88-201ENST00000605759 454 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 AC100812.1-201ENST00000607622 580 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 MIR1244-1-201ENST00000612829 85 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 MIR5739-201ENST00000619803 80 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.66□□□□□ -1.98
NPAS1Q99742 MIR1244-3-201ENST00000635744 85 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 MIR1244-2-201ENST00000636449 85 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 MIR1244-4-202ENST00000636813 85 ntBASIC2.66□□□□□ -1.98
NPAS1Q99742 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
NPAS1Q99742 SNORA18.3-201ENST00000384122 132 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 MIR627-201ENST00000384979 97 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 MIR625-201ENST00000385047 85 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 UBA52P6-201ENST00000399822 382 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 MIR1302-11-201ENST00000408051 138 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 MIR1302-9-201ENST00000408365 138 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 MIR1302-10-201ENST00000408734 138 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 RNA5SP274-201ENST00000410484 108 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 RNA5SP492-201ENST00000411330 114 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 HMGB3P2-201ENST00000411913 584 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 HMGN2P35-201ENST00000412164 270 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 AL358453.1-201ENST00000422522 250 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 MICF-203ENST00000432679 129 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.65□□□□□ -1.99
NPAS1Q99742 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.65□□□□□ -1.99
NPAS1Q99742 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.65□□□□□ -1.99
NPAS1Q99742 AC145146.1-201ENST00000496370 254 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 AC105758.1-201ENST00000506038 399 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 RNU6-826P-201ENST00000516827 104 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 HSPE1P20-201ENST00000538133 289 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.65□□□□□ -1.99
NPAS1Q99742 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.65□□□□□ -1.99
NPAS1Q99742 CYP4A27P-201ENST00000567218 190 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.65□□□□□ -1.99
NPAS1Q99742 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.65□□□□□ -1.99
NPAS1Q99742 AL078605.1-201ENST00000603529 500 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 MIR1302-2-201ENST00000607096 138 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.65□□□□□ -1.99
NPAS1Q99742 SCARNA4-201ENST00000629045 128 ntBASIC2.65□□□□□ -1.99
NPAS1Q99742 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
NPAS1Q99742 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NPAS1Q99742 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.64□□□□□ -1.99
NPAS1Q99742 AC009487.2-201ENST00000420969 6821 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.64□□□□□ -1.99
NPAS1Q99742 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NPAS1Q99742 AC069528.2-201ENST00000624849 1991 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 Y_RNA.128-201ENST00000363391 112 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 Y_RNA.138-201ENST00000363462 102 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 RNU6-461P-201ENST00000364195 107 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 Y_RNA.463-201ENST00000384271 102 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 Y_RNA.577-201ENST00000384794 101 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 MIR483-201ENST00000385070 76 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 MIR559-201ENST00000385188 96 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 SNORA12.2-201ENST00000391040 156 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 FO393413.1-201ENST00000402892 195 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 MTCYBP2-201ENST00000407745 171 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 EEF1A1P41-201ENST00000414667 207 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.64□□□□□ -1.99
NPAS1Q99742 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NPAS1Q99742 AC005534.2-201ENST00000431047 433 ntBASIC2.64□□□□□ -1.99
NPAS1Q99742 AC099799.1-201ENST00000439809 192 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms