Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 GXYLT1P1-201ENST00000446657 490 ntBASIC0.08□□□□□ -2.4
IFT140Q96RY7 MRPL42P4-201ENST00000453267 443 ntBASIC0.08□□□□□ -2.4
IFT140Q96RY7 AC108729.2-201ENST00000476543 840 ntBASIC0.08□□□□□ -2.4
IFT140Q96RY7 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.08□□□□□ -2.4
IFT140Q96RY7 MTND2P33-201ENST00000506452 1031 ntBASIC0.08□□□□□ -2.4
IFT140Q96RY7 RN7SKP12-201ENST00000516275 143 ntBASIC0.08□□□□□ -2.4
IFT140Q96RY7 AC091163.3-201ENST00000518269 1144 ntBASIC0.08□□□□□ -2.4
IFT140Q96RY7 AL133153.1-201ENST00000557756 303 ntBASIC0.08□□□□□ -2.4
IFT140Q96RY7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.08□□□□□ -2.4
IFT140Q96RY7 AL360219.1-201ENST00000610230 366 ntBASIC0.08□□□□□ -2.4
IFT140Q96RY7 RNU6-923P-201ENST00000364753 107 ntBASIC0.07□□□□□ -2.4
IFT140Q96RY7 SNORA4.2-201ENST00000365313 147 ntBASIC0.07□□□□□ -2.4
IFT140Q96RY7 AL121578.1-201ENST00000428051 892 ntBASIC0.07□□□□□ -2.4
IFT140Q96RY7 MTCO3P28-201ENST00000513351 515 ntBASIC0.07□□□□□ -2.4
IFT140Q96RY7 RNU5F-2P-201ENST00000516066 82 ntBASIC0.07□□□□□ -2.4
IFT140Q96RY7 IGLVI-20-201ENST00000519296 130 ntBASIC0.07□□□□□ -2.4
IFT140Q96RY7 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.07□□□□□ -2.4
IFT140Q96RY7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.07□□□□□ -2.4
IFT140Q96RY7 AC060771.1-201ENST00000582031 164 ntBASIC0.07□□□□□ -2.4
IFT140Q96RY7 AC096720.1-201ENST00000604441 183 ntBASIC0.07□□□□□ -2.4
IFT140Q96RY7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.07□□□□□ -2.4
IFT140Q96RY7 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.07□□□□□ -2.4
IFT140Q96RY7 RNU6-438P-201ENST00000365561 103 ntBASIC0.06□□□□□ -2.4
IFT140Q96RY7 RNU6-481P-201ENST00000384194 107 ntBASIC0.06□□□□□ -2.4
IFT140Q96RY7 SNORD116-20-201ENST00000384529 92 ntBASIC0.06□□□□□ -2.4
IFT140Q96RY7 SNORD99-201ENST00000408612 74 ntBASIC0.06□□□□□ -2.4
IFT140Q96RY7 RNU6-1025P-201ENST00000410629 104 ntBASIC0.06□□□□□ -2.4
IFT140Q96RY7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.06□□□□□ -2.4
IFT140Q96RY7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.06□□□□□ -2.4
IFT140Q96RY7 RNU7-34P-201ENST00000459394 64 ntBASIC0.06□□□□□ -2.4
IFT140Q96RY7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.06□□□□□ -2.4
IFT140Q96RY7 SNORA68.3-201ENST00000515906 83 ntBASIC0.06□□□□□ -2.4
IFT140Q96RY7 SNRPGP1-201ENST00000553864 222 ntBASIC0.06□□□□□ -2.4
IFT140Q96RY7 AC021506.2-201ENST00000612354 169 ntBASIC0.06□□□□□ -2.4
IFT140Q96RY7 AC010975.3-201ENST00000618727 978 ntBASIC0.06□□□□□ -2.4
IFT140Q96RY7 AL159153.1-201ENST00000619688 317 ntBASIC0.06□□□□□ -2.4
IFT140Q96RY7 SNORD3E-202ENST00000627253 216 ntBASIC0.06□□□□□ -2.4
IFT140Q96RY7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
IFT140Q96RY7 RNY4P3-201ENST00000365254 95 ntBASIC0.05□□□□□ -2.4
IFT140Q96RY7 RNU6-950P-201ENST00000384651 107 ntBASIC0.05□□□□□ -2.4
IFT140Q96RY7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.05□□□□□ -2.4
IFT140Q96RY7 MIR1295A-201ENST00000408463 79 ntBASIC0.05□□□□□ -2.4
IFT140Q96RY7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.05□□□□□ -2.4
IFT140Q96RY7 snoU109.2-201ENST00000459316 135 ntBASIC0.05□□□□□ -2.4
IFT140Q96RY7 AC104982.1-201ENST00000478775 574 ntBASIC0.05□□□□□ -2.4
IFT140Q96RY7 AC010587.2-201ENST00000511727 448 ntBASIC0.05□□□□□ -2.4
IFT140Q96RY7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.05□□□□□ -2.4
IFT140Q96RY7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.05□□□□□ -2.4
IFT140Q96RY7 AC090330.1-201ENST00000588646 764 ntBASIC0.05□□□□□ -2.4
IFT140Q96RY7 MIR411-201ENST00000362239 96 ntBASIC0.04□□□□□ -2.4
IFT140Q96RY7 MTCYBP5-201ENST00000423752 1135 ntBASIC0.04□□□□□ -2.4
IFT140Q96RY7 DPRXP1-201ENST00000426312 460 ntBASIC0.04□□□□□ -2.4
IFT140Q96RY7 MTND2P20-201ENST00000440805 661 ntBASIC0.04□□□□□ -2.4
IFT140Q96RY7 AL162395.1-201ENST00000457882 422 ntBASIC0.04□□□□□ -2.4
IFT140Q96RY7 RPS26P48-201ENST00000491713 339 ntBASIC0.04□□□□□ -2.4
IFT140Q96RY7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.04□□□□□ -2.4
IFT140Q96RY7 AL132657.2-201ENST00000564417 358 ntBASIC0.04□□□□□ -2.4
IFT140Q96RY7 AC007363.1-201ENST00000604736 620 ntBASIC0.04□□□□□ -2.4
IFT140Q96RY7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.04□□□□□ -2.4
IFT140Q96RY7 MIRLET7D-201ENST00000362263 87 ntBASIC0.03□□□□□ -2.4
IFT140Q96RY7 RNU6-1335P-201ENST00000365426 107 ntBASIC0.03□□□□□ -2.4
IFT140Q96RY7 MTCO1P21-201ENST00000416634 589 ntBASIC0.03□□□□□ -2.4
IFT140Q96RY7 MTCO2P1-201ENST00000424648 477 ntBASIC0.03□□□□□ -2.4
IFT140Q96RY7 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.03□□□□□ -2.4
IFT140Q96RY7 AL031313.1-201ENST00000448435 256 ntBASIC0.03□□□□□ -2.4
IFT140Q96RY7 AC003071.1-201ENST00000451219 789 ntBASIC0.03□□□□□ -2.4
IFT140Q96RY7 AC104563.1-201ENST00000476147 376 ntBASIC0.03□□□□□ -2.4
IFT140Q96RY7 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.03□□□□□ -2.4
IFT140Q96RY7 AC112206.3-201ENST00000514578 389 ntBASIC0.03□□□□□ -2.4
IFT140Q96RY7 RNU6-583P-201ENST00000516012 92 ntBASIC0.03□□□□□ -2.4
IFT140Q96RY7 Y_RNA.136-201ENST00000363444 102 ntBASIC0.03□□□□□ -2.41
IFT140Q96RY7 SNORD32B-201ENST00000364460 84 ntBASIC0.03□□□□□ -2.41
IFT140Q96RY7 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.03□□□□□ -2.41
IFT140Q96RY7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.03□□□□□ -2.41
IFT140Q96RY7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.03□□□□□ -2.41
IFT140Q96RY7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.03□□□□□ -2.41
IFT140Q96RY7 MTND1P31-201ENST00000449206 961 ntBASIC0.03□□□□□ -2.41
IFT140Q96RY7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.03□□□□□ -2.41
IFT140Q96RY7 AC108740.1-201ENST00000498629 225 ntBASIC0.03□□□□□ -2.41
IFT140Q96RY7 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.03□□□□□ -2.41
IFT140Q96RY7 HMGB1P28-201ENST00000507778 552 ntBASIC0.03□□□□□ -2.41
IFT140Q96RY7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.03□□□□□ -2.41
IFT140Q96RY7 AC025627.3-201ENST00000582078 182 ntBASIC0.03□□□□□ -2.41
IFT140Q96RY7 AL513534.2-201ENST00000603836 250 ntBASIC0.03□□□□□ -2.41
IFT140Q96RY7 Z98751.3-201ENST00000604447 521 ntBASIC0.03□□□□□ -2.41
IFT140Q96RY7 AL450270.1-201ENST00000606160 391 ntBASIC0.03□□□□□ -2.41
IFT140Q96RY7 AP000676.3-201ENST00000623299 569 ntBASIC0.03□□□□□ -2.41
IFT140Q96RY7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.02□□□□□ -2.41
IFT140Q96RY7 RNU6-701P-201ENST00000384059 107 ntBASIC0.02□□□□□ -2.41
IFT140Q96RY7 RNU6-1122P-201ENST00000384449 107 ntBASIC0.02□□□□□ -2.41
IFT140Q96RY7 SNORA8.3-201ENST00000384679 139 ntBASIC0.02□□□□□ -2.41
IFT140Q96RY7 SNORA12-201ENST00000391162 147 ntBASIC0.02□□□□□ -2.41
IFT140Q96RY7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.02□□□□□ -2.41
IFT140Q96RY7 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.02□□□□□ -2.41
IFT140Q96RY7 AL365338.1-201ENST00000422282 858 ntBASIC0.02□□□□□ -2.41
IFT140Q96RY7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.02□□□□□ -2.41
IFT140Q96RY7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.02□□□□□ -2.41
IFT140Q96RY7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.02□□□□□ -2.41
IFT140Q96RY7 RNU6-947P-201ENST00000516264 106 ntBASIC0.02□□□□□ -2.41
IFT140Q96RY7 RNU6-922P-201ENST00000516753 99 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms