Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.93□□□□□ -2.1
ZNF560Q96MR9 AC108210.2-201ENST00000503681 201 ntBASIC1.93□□□□□ -2.1
ZNF560Q96MR9 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.93□□□□□ -2.1
ZNF560Q96MR9 CCDC34P1-201ENST00000507441 517 ntBASIC1.93□□□□□ -2.1
ZNF560Q96MR9 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.93□□□□□ -2.1
ZNF560Q96MR9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.93□□□□□ -2.1
ZNF560Q96MR9 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.93□□□□□ -2.1
ZNF560Q96MR9 AP001836.1-201ENST00000604675 523 ntBASIC1.93□□□□□ -2.1
ZNF560Q96MR9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.93□□□□□ -2.1
ZNF560Q96MR9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
ZNF560Q96MR9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
ZNF560Q96MR9 RNU6-82P-201ENST00000363970 107 ntBASIC1.92□□□□□ -2.1
ZNF560Q96MR9 SNORD116-1-201ENST00000384335 95 ntBASIC1.92□□□□□ -2.1
ZNF560Q96MR9 SNORA8-201ENST00000384574 139 ntBASIC1.92□□□□□ -2.1
ZNF560Q96MR9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
ZNF560Q96MR9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.92□□□□□ -2.1
ZNF560Q96MR9 RPL23AP6-201ENST00000446637 472 ntBASIC1.92□□□□□ -2.1
ZNF560Q96MR9 RNU7-138P-201ENST00000459479 64 ntBASIC1.92□□□□□ -2.1
ZNF560Q96MR9 AC087884.1-201ENST00000469738 328 ntBASIC1.92□□□□□ -2.1
ZNF560Q96MR9 RPS29P11-201ENST00000496507 171 ntBASIC1.92□□□□□ -2.1
ZNF560Q96MR9 AC016632.1-201ENST00000503994 196 ntBASIC1.92□□□□□ -2.1
ZNF560Q96MR9 SNORA14.1-201ENST00000516113 141 ntBASIC1.92□□□□□ -2.1
ZNF560Q96MR9 SNORA31.16-201ENST00000516773 139 ntBASIC1.92□□□□□ -2.1
ZNF560Q96MR9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.92□□□□□ -2.1
ZNF560Q96MR9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.92□□□□□ -2.1
ZNF560Q96MR9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.92□□□□□ -2.1
ZNF560Q96MR9 MIR3923-201ENST00000579521 83 ntBASIC1.92□□□□□ -2.1
ZNF560Q96MR9 MIR4524B-201ENST00000581569 115 ntBASIC1.92□□□□□ -2.1
ZNF560Q96MR9 MIR3611-201ENST00000584484 83 ntBASIC1.92□□□□□ -2.1
ZNF560Q96MR9 AL022345.1-201ENST00000607292 135 ntBASIC1.92□□□□□ -2.1
ZNF560Q96MR9 U1.36-201ENST00000620684 176 ntBASIC1.92□□□□□ -2.1
ZNF560Q96MR9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
ZNF560Q96MR9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.92□□□□□ -2.1
ZNF560Q96MR9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.92□□□□□ -2.1
ZNF560Q96MR9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
ZNF560Q96MR9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
ZNF560Q96MR9 RNU6-26P-201ENST00000383985 107 ntBASIC1.91□□□□□ -2.1
ZNF560Q96MR9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
ZNF560Q96MR9 RNU6-1106P-201ENST00000390845 107 ntBASIC1.91□□□□□ -2.1
ZNF560Q96MR9 SUMO2P12-201ENST00000405924 140 ntBASIC1.91□□□□□ -2.1
ZNF560Q96MR9 AL357139.1-201ENST00000407792 426 ntBASIC1.91□□□□□ -2.1
ZNF560Q96MR9 AP000275.1-201ENST00000411943 390 ntBASIC1.91□□□□□ -2.1
ZNF560Q96MR9 AC244636.1-201ENST00000421152 228 ntBASIC1.91□□□□□ -2.1
ZNF560Q96MR9 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.91□□□□□ -2.1
ZNF560Q96MR9 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.91□□□□□ -2.1
ZNF560Q96MR9 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.91□□□□□ -2.1
ZNF560Q96MR9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.91□□□□□ -2.1
ZNF560Q96MR9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.91□□□□□ -2.1
ZNF560Q96MR9 AP005639.2-201ENST00000527592 928 ntBASIC1.91□□□□□ -2.1
ZNF560Q96MR9 AC104383.1-201ENST00000530297 370 ntBASIC1.91□□□□□ -2.1
ZNF560Q96MR9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.91□□□□□ -2.1
ZNF560Q96MR9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.91□□□□□ -2.1
ZNF560Q96MR9 AL078605.1-201ENST00000603529 500 ntBASIC1.91□□□□□ -2.1
ZNF560Q96MR9 AC139792.3-201ENST00000623525 224 ntBASIC1.91□□□□□ -2.1
ZNF560Q96MR9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ZNF560Q96MR9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
ZNF560Q96MR9 Y_RNA.481-201ENST00000384373 102 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 RNA5SP219-201ENST00000390940 113 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 SNORA12-201ENST00000391162 147 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 RNA5SP201-201ENST00000410316 124 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 AL663109.1-201ENST00000411498 844 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 EIF4EP2-201ENST00000422816 654 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 AL121601.2-201ENST00000438019 707 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.9□□□□□ -2.11
ZNF560Q96MR9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.9□□□□□ -2.11
ZNF560Q96MR9 RNU6-261P-201ENST00000459506 102 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 MTCO3P38-201ENST00000468910 766 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 AC083798.1-201ENST00000472671 131 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 AC008628.2-201ENST00000502605 298 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.9□□□□□ -2.11
ZNF560Q96MR9 RNU6-991P-201ENST00000516168 107 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 RNU6-405P-201ENST00000516637 110 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.9□□□□□ -2.11
ZNF560Q96MR9 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.9□□□□□ -2.11
ZNF560Q96MR9 AP005136.1-201ENST00000579765 429 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 VN1R80P-201ENST00000597126 338 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 AC103705.1-201ENST00000619013 241 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.9□□□□□ -2.11
ZNF560Q96MR9 AL359757.2-201ENST00000624309 274 ntBASIC1.9□□□□□ -2.11
ZNF560Q96MR9 RNU6-1322P-201ENST00000364309 107 ntBASIC1.89□□□□□ -2.11
ZNF560Q96MR9 Y_RNA.381-201ENST00000365666 102 ntBASIC1.89□□□□□ -2.11
ZNF560Q96MR9 AL356432.1-201ENST00000405809 419 ntBASIC1.89□□□□□ -2.11
ZNF560Q96MR9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.89□□□□□ -2.11
ZNF560Q96MR9 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ZNF560Q96MR9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.89□□□□□ -2.11
ZNF560Q96MR9 UBE2V1P4-201ENST00000425374 344 ntBASIC1.89□□□□□ -2.11
ZNF560Q96MR9 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.89□□□□□ -2.11
ZNF560Q96MR9 TPTE2P5-203ENST00000458118 728 ntBASIC1.89□□□□□ -2.11
ZNF560Q96MR9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.89□□□□□ -2.11
ZNF560Q96MR9 RNU6-189P-201ENST00000516120 101 ntBASIC1.89□□□□□ -2.11
ZNF560Q96MR9 RNU6-567P-201ENST00000516746 107 ntBASIC1.89□□□□□ -2.11
ZNF560Q96MR9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.89□□□□□ -2.11
ZNF560Q96MR9 AC087441.2-201ENST00000529141 262 ntBASIC1.89□□□□□ -2.11
ZNF560Q96MR9 MIR4419B-201ENST00000577260 68 ntBASIC1.89□□□□□ -2.11
ZNF560Q96MR9 MIR3618-201ENST00000580330 88 ntBASIC1.89□□□□□ -2.11
ZNF560Q96MR9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.89□□□□□ -2.11
ZNF560Q96MR9 CYP2C61P-201ENST00000604072 290 ntBASIC1.89□□□□□ -2.11
ZNF560Q96MR9 AC073534.2-201ENST00000620377 381 ntBASIC1.89□□□□□ -2.11
ZNF560Q96MR9 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ZNF560Q96MR9 AL450472.1-202ENST00000637286 180 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms