Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 Y_RNA.16-201ENST00000362421 102 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 RNU1-62P-201ENST00000362599 164 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 U3.9-201ENST00000363823 204 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 RNA5SP139-201ENST00000364340 117 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 RNU6-378P-201ENST00000384324 107 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 MT-TR-201ENST00000387439 65 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 AL603910.2-201ENST00000407268 136 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 HMGN2P31-201ENST00000432430 273 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 HSPE1P25-201ENST00000455484 251 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 AL121594.1-201ENST00000475906 575 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 HMGB3P17-201ENST00000504195 649 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 RNU2-27P-201ENST00000516185 142 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 RNU6-111P-201ENST00000517179 105 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 CYCSP30-201ENST00000546447 172 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 AC233702.2-202ENST00000562547 291 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 AC005176.2-201ENST00000596933 147 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 AL359854.1-201ENST00000614203 1594 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 AC093908.1-201ENST00000623125 8092 ntBASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
FOXRED1Q96CU9 AL161912.2-201ENST00000565707 3007 ntBASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 AC058791.1-201ENST00000608412 3198 ntBASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 RNU6-799P-201ENST00000363567 107 ntBASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 RNA5SP479-201ENST00000364858 117 ntBASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 Y_RNA.498-201ENST00000384460 102 ntBASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 RNU6-1026P-201ENST00000384465 108 ntBASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 AL512633.1-201ENST00000399931 655 ntBASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 SNORA3.3-201ENST00000408712 125 ntBASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 RNA5SP201-201ENST00000410316 124 ntBASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 RPL23AP36-201ENST00000413895 458 ntBASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 AC097463.2-201ENST00000421074 142 ntBASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 AC006539.3-201ENST00000454258 129 ntBASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 AC093663.1-201ENST00000497190 394 ntBASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 SERF1AP1-201ENST00000514575 187 ntBASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 AL670379.2-201ENST00000604983 252 ntBASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
FOXRED1Q96CU9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 RNU6-1266P-201ENST00000362794 105 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 RNU6-961P-201ENST00000363893 105 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 SNORA72.2-201ENST00000365028 127 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 RNU6-1175P-201ENST00000365200 107 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 RNU6-326P-201ENST00000365480 107 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 RNU6-102P-201ENST00000384485 104 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 Y_RNA.570-201ENST00000384750 101 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 RNU4-30P-201ENST00000410245 143 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 Z98742.2-201ENST00000431564 187 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 NDUFB1P1-201ENST00000435191 180 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 AL358232.1-201ENST00000448030 501 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 RNU6-625P-201ENST00000459412 107 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 AC103975.1-201ENST00000482506 483 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 RPL23AP70-201ENST00000483361 460 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 AC145146.1-201ENST00000496370 254 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 RNU6-579P-201ENST00000516879 102 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 RNU2-31P-201ENST00000516954 155 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 AC022695.1-201ENST00000522089 237 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 MIR4765-201ENST00000585007 77 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 MZT1P2-201ENST00000604387 248 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 AC006001.4-201ENST00000622243 395 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 MAPK10-362ENST00000641864 4484 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 AC069528.2-201ENST00000624849 1991 ntBASIC3.18□□□□□ -1.9
FOXRED1Q96CU9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 RNU4-15P-201ENST00000362613 141 ntBASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 RNA5SP42-201ENST00000364278 115 ntBASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 RNU6-1310P-201ENST00000384153 107 ntBASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 Y_RNA.569-201ENST00000384749 103 ntBASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
FOXRED1Q96CU9 RNU1-101P-201ENST00000391171 127 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms