Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF428Q96B54 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF428Q96B54 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF428Q96B54 AC117470.1-201ENST00000381974 330 ntBASIC4□□□□□ -1.77
ZNF428Q96B54 RNU6-1227P-201ENST00000383981 107 ntBASIC4□□□□□ -1.77
ZNF428Q96B54 Y_RNA.428-201ENST00000384078 102 ntBASIC4□□□□□ -1.77
ZNF428Q96B54 RNU6-331P-201ENST00000384724 107 ntBASIC4□□□□□ -1.77
ZNF428Q96B54 MIR634-201ENST00000385208 97 ntBASIC4□□□□□ -1.77
ZNF428Q96B54 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4□□□□□ -1.77
ZNF428Q96B54 MTCO2P12-201ENST00000427426 682 ntBASIC4□□□□□ -1.77
ZNF428Q96B54 AL445687.1-201ENST00000439946 251 ntBASIC4□□□□□ -1.77
ZNF428Q96B54 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4□□□□□ -1.77
ZNF428Q96B54 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4□□□□□ -1.77
ZNF428Q96B54 AC027575.1-201ENST00000481064 460 ntBASIC4□□□□□ -1.77
ZNF428Q96B54 AC021146.2-201ENST00000504736 556 ntBASIC4□□□□□ -1.77
ZNF428Q96B54 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4□□□□□ -1.77
ZNF428Q96B54 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4□□□□□ -1.77
ZNF428Q96B54 RNU6-911P-201ENST00000516523 104 ntBASIC4□□□□□ -1.77
ZNF428Q96B54 RNU6-586P-201ENST00000517265 104 ntBASIC4□□□□□ -1.77
ZNF428Q96B54 EIF4A1P12-201ENST00000551910 141 ntBASIC4□□□□□ -1.77
ZNF428Q96B54 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4□□□□□ -1.77
ZNF428Q96B54 AC004584.2-201ENST00000570407 410 ntBASIC4□□□□□ -1.77
ZNF428Q96B54 MIR3117-201ENST00000584034 78 ntBASIC4□□□□□ -1.77
ZNF428Q96B54 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4□□□□□ -1.77
ZNF428Q96B54 U4atac.1-201ENST00000618345 95 ntBASIC4□□□□□ -1.77
ZNF428Q96B54 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4□□□□□ -1.77
ZNF428Q96B54 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF428Q96B54 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4□□□□□ -1.77
ZNF428Q96B54 SNORA80A-201ENST00000363922 136 ntBASIC3.99□□□□□ -1.77
ZNF428Q96B54 SET-203ENST00000372688 801 ntTSL 2 BASIC3.99□□□□□ -1.77
ZNF428Q96B54 RNU6-474P-201ENST00000384243 107 ntBASIC3.99□□□□□ -1.77
ZNF428Q96B54 AC003685.2-201ENST00000422795 395 ntBASIC3.99□□□□□ -1.77
ZNF428Q96B54 AL161788.1-201ENST00000441805 169 ntBASIC3.99□□□□□ -1.77
ZNF428Q96B54 RPL23AP70-201ENST00000483361 460 ntBASIC3.99□□□□□ -1.77
ZNF428Q96B54 CKS1BP2-201ENST00000497342 240 ntBASIC3.99□□□□□ -1.77
ZNF428Q96B54 SNORA48.11-201ENST00000517015 89 ntBASIC3.99□□□□□ -1.77
ZNF428Q96B54 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.99□□□□□ -1.77
ZNF428Q96B54 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF428Q96B54 PCGEM1.1-201ENST00000613431 131 ntBASIC3.99□□□□□ -1.77
ZNF428Q96B54 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.98□□□□□ -1.77
ZNF428Q96B54 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF428Q96B54 MIR369-201ENST00000362155 70 ntBASIC3.98□□□□□ -1.77
ZNF428Q96B54 RNU6-1115P-201ENST00000362490 106 ntBASIC3.98□□□□□ -1.77
ZNF428Q96B54 RNU6-245P-201ENST00000384020 107 ntBASIC3.98□□□□□ -1.77
ZNF428Q96B54 MIR190B-201ENST00000401119 79 ntBASIC3.98□□□□□ -1.77
ZNF428Q96B54 FO393413.1-201ENST00000402892 195 ntBASIC3.98□□□□□ -1.77
ZNF428Q96B54 HMGB3P2-201ENST00000411913 584 ntBASIC3.98□□□□□ -1.77
ZNF428Q96B54 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.98□□□□□ -1.77
ZNF428Q96B54 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.98□□□□□ -1.77
ZNF428Q96B54 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.98□□□□□ -1.77
ZNF428Q96B54 AF186996.7-201ENST00000492781 209 ntBASIC3.98□□□□□ -1.77
ZNF428Q96B54 SNORA31.16-201ENST00000516773 139 ntBASIC3.98□□□□□ -1.77
ZNF428Q96B54 RNU6-1213P-201ENST00000517075 94 ntBASIC3.98□□□□□ -1.77
ZNF428Q96B54 SNORD116.3-201ENST00000517176 78 ntBASIC3.98□□□□□ -1.77
ZNF428Q96B54 AC068657.1-201ENST00000520807 306 ntBASIC3.98□□□□□ -1.77
ZNF428Q96B54 AC093331.1-201ENST00000521474 169 ntBASIC3.98□□□□□ -1.77
ZNF428Q96B54 SNRPGP18-201ENST00000553000 214 ntBASIC3.98□□□□□ -1.77
ZNF428Q96B54 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF428Q96B54 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
ZNF428Q96B54 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF428Q96B54 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
ZNF428Q96B54 RNU6-280P-201ENST00000364145 104 ntBASIC3.97□□□□□ -1.77
ZNF428Q96B54 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.97□□□□□ -1.77
ZNF428Q96B54 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.97□□□□□ -1.77
ZNF428Q96B54 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.97□□□□□ -1.77
ZNF428Q96B54 RN7SKP40-201ENST00000517211 242 ntBASIC3.97□□□□□ -1.77
ZNF428Q96B54 AL078605.1-201ENST00000603529 500 ntBASIC3.97□□□□□ -1.77
ZNF428Q96B54 AL713866.2-201ENST00000603579 219 ntBASIC3.97□□□□□ -1.77
ZNF428Q96B54 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.97□□□□□ -1.77
ZNF428Q96B54 SNRPGP20-201ENST00000604477 205 ntBASIC3.97□□□□□ -1.77
ZNF428Q96B54 SCARNA15.3-201ENST00000626315 122 ntBASIC3.97□□□□□ -1.77
ZNF428Q96B54 SCARNA4.1-201ENST00000628597 123 ntBASIC3.97□□□□□ -1.77
ZNF428Q96B54 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF428Q96B54 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
ZNF428Q96B54 AL161431.1-201ENST00000618966 4205 ntBASIC3.96□□□□□ -1.78
ZNF428Q96B54 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.96□□□□□ -1.78
ZNF428Q96B54 AC073325.2-201ENST00000339545 159 ntBASIC3.96□□□□□ -1.78
ZNF428Q96B54 RNU6-1180P-201ENST00000364935 107 ntBASIC3.96□□□□□ -1.78
ZNF428Q96B54 Y_RNA.463-201ENST00000384271 102 ntBASIC3.96□□□□□ -1.78
ZNF428Q96B54 Y_RNA.473-201ENST00000384333 102 ntBASIC3.96□□□□□ -1.78
ZNF428Q96B54 SNORA46-201ENST00000384762 135 ntBASIC3.96□□□□□ -1.78
ZNF428Q96B54 MIR218-1-201ENST00000384999 110 ntBASIC3.96□□□□□ -1.78
ZNF428Q96B54 MIR559-201ENST00000385188 96 ntBASIC3.96□□□□□ -1.78
ZNF428Q96B54 AC005534.2-201ENST00000431047 433 ntBASIC3.96□□□□□ -1.78
ZNF428Q96B54 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.96□□□□□ -1.78
ZNF428Q96B54 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.96□□□□□ -1.78
ZNF428Q96B54 Y_RNA.631-201ENST00000459607 101 ntBASIC3.96□□□□□ -1.78
ZNF428Q96B54 RPS29P26-201ENST00000477483 171 ntBASIC3.96□□□□□ -1.78
ZNF428Q96B54 RPL23AP94-201ENST00000512518 302 ntBASIC3.96□□□□□ -1.78
ZNF428Q96B54 RNU6-475P-201ENST00000516073 104 ntBASIC3.96□□□□□ -1.78
ZNF428Q96B54 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.96□□□□□ -1.78
ZNF428Q96B54 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.96□□□□□ -1.78
ZNF428Q96B54 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.96□□□□□ -1.78
ZNF428Q96B54 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ZNF428Q96B54 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ZNF428Q96B54 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
ZNF428Q96B54 BX322639.1-202ENST00000423987 2213 ntBASIC3.95□□□□□ -1.78
ZNF428Q96B54 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.95□□□□□ -1.78
ZNF428Q96B54 RNU4-15P-201ENST00000362613 141 ntBASIC3.95□□□□□ -1.78
ZNF428Q96B54 Y_RNA.364-201ENST00000365532 101 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms