Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 RPL23AP88-201ENST00000605759 454 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 SCARNA4-201ENST00000629045 128 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 AC134503.1-201ENST00000633048 54 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HPS3Q969F9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HPS3Q969F9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.13□□□□□ -1.91
HPS3Q969F9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
HPS3Q969F9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HPS3Q969F9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HPS3Q969F9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HPS3Q969F9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HPS3Q969F9 Y_RNA.40-201ENST00000362645 93 ntBASIC3.13□□□□□ -1.91
HPS3Q969F9 SNORA5B-201ENST00000363786 132 ntBASIC3.13□□□□□ -1.91
HPS3Q969F9 SNORA80A-201ENST00000363922 136 ntBASIC3.13□□□□□ -1.91
HPS3Q969F9 Y_RNA.445-201ENST00000384168 102 ntBASIC3.13□□□□□ -1.91
HPS3Q969F9 CBX3P9-201ENST00000402326 552 ntBASIC3.13□□□□□ -1.91
HPS3Q969F9 AL513477.1-202ENST00000417061 214 ntBASIC3.13□□□□□ -1.91
HPS3Q969F9 AC007098.1-201ENST00000420122 367 ntBASIC3.13□□□□□ -1.91
HPS3Q969F9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.13□□□□□ -1.91
HPS3Q969F9 MTCYBP10-201ENST00000424905 650 ntBASIC3.13□□□□□ -1.91
HPS3Q969F9 AIMP1P2-201ENST00000425294 312 ntBASIC3.13□□□□□ -1.91
HPS3Q969F9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.13□□□□□ -1.91
HPS3Q969F9 RN7SL499P-201ENST00000481141 276 ntBASIC3.13□□□□□ -1.91
HPS3Q969F9 RPL23AP75-201ENST00000491601 451 ntBASIC3.13□□□□□ -1.91
HPS3Q969F9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.13□□□□□ -1.91
HPS3Q969F9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.13□□□□□ -1.91
HPS3Q969F9 MIR3199-1-201ENST00000582434 88 ntBASIC3.13□□□□□ -1.91
HPS3Q969F9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HPS3Q969F9 AC090115.4-201ENST00000609970 188 ntBASIC3.13□□□□□ -1.91
HPS3Q969F9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
HPS3Q969F9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.12□□□□□ -1.91
HPS3Q969F9 Y_RNA.394-201ENST00000383942 103 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 Y_RNA.395-201ENST00000383945 109 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 Y_RNA.428-201ENST00000384078 102 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 Y_RNA.577-201ENST00000384794 101 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 MIR218-1-201ENST00000384999 110 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 MIR559-201ENST00000385188 96 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 U6atac.2-201ENST00000408644 118 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 RNU6-1328P-201ENST00000410938 106 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 AL358453.1-201ENST00000422522 250 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 AC012306.1-201ENST00000423267 114 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.12□□□□□ -1.91
HPS3Q969F9 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.12□□□□□ -1.91
HPS3Q969F9 AC099799.1-201ENST00000439809 192 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.12□□□□□ -1.91
HPS3Q969F9 Z96811.1-201ENST00000445880 108 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 snoU13.30-201ENST00000458951 104 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 Y_RNA.631-201ENST00000459607 101 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.12□□□□□ -1.91
HPS3Q969F9 AC073901.1-201ENST00000462471 408 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 AC021146.2-201ENST00000504736 556 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.12□□□□□ -1.91
HPS3Q969F9 RNU6-1153P-201ENST00000516760 105 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.12□□□□□ -1.91
HPS3Q969F9 AC079600.2-201ENST00000550076 130 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 SNRPGP18-201ENST00000553000 214 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 AL442663.2-201ENST00000554385 511 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 MIR3923-201ENST00000579521 83 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 RPL30P11-203ENST00000598995 310 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.12□□□□□ -1.91
HPS3Q969F9 AL034555.1-201ENST00000604816 211 ntBASIC3.12□□□□□ -1.91
HPS3Q969F9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.12□□□□□ -1.91
HPS3Q969F9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.12□□□□□ -1.91
HPS3Q969F9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HPS3Q969F9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
HPS3Q969F9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.11□□□□□ -1.91
HPS3Q969F9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HPS3Q969F9 RNU6-1115P-201ENST00000362490 106 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 RNU5B-2P-201ENST00000363036 113 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 RNU6-99P-201ENST00000364721 107 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 RNU6-1227P-201ENST00000383981 107 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 Y_RNA.463-201ENST00000384271 102 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 RPL21P75-201ENST00000396599 483 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 RPL21P28-201ENST00000401418 483 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 AL590004.2-201ENST00000404787 371 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 RNA5SP344-201ENST00000411081 104 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 AL354751.2-201ENST00000415471 210 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 AL590556.1-201ENST00000423231 483 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 AC008267.5-201ENST00000424928 265 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 AC107083.1-201ENST00000439643 279 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 AL135938.1-201ENST00000443141 297 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 RPL21P39-201ENST00000463605 483 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 AC087477.1-201ENST00000465747 340 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 AC087190.1-201ENST00000484462 480 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 AC093591.1-201ENST00000491435 481 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 RPL21P16-201ENST00000495531 483 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 SNORA31.16-201ENST00000516773 139 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 RNU6-699P-201ENST00000517081 110 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.11□□□□□ -1.91
HPS3Q969F9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.11□□□□□ -1.91
HPS3Q969F9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.11□□□□□ -1.91
HPS3Q969F9 AC004584.2-201ENST00000570407 410 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 AC104581.2-201ENST00000572227 430 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 MIR5701-3-201ENST00000578890 82 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 MIR5701-1-201ENST00000585138 82 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 AL356055.1-201ENST00000602528 446 ntBASIC3.11□□□□□ -1.91
HPS3Q969F9 AC100812.1-201ENST00000607622 580 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms