Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
PTP4A1Q93096 DEFB108C-201ENST00000400154 252 ntBASIC1.89□□□□□ -2.11
PTP4A1Q93096 VN1R36P-201ENST00000414936 291 ntBASIC1.89□□□□□ -2.11
PTP4A1Q93096 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.89□□□□□ -2.11
PTP4A1Q93096 RNU7-14P-201ENST00000459331 62 ntBASIC1.89□□□□□ -2.11
PTP4A1Q93096 SRRM1P2-201ENST00000464531 1192 ntBASIC1.89□□□□□ -2.11
PTP4A1Q93096 RPS23P5-201ENST00000495419 428 ntBASIC1.89□□□□□ -2.11
PTP4A1Q93096 Y_RNA.654-201ENST00000497848 106 ntBASIC1.89□□□□□ -2.11
PTP4A1Q93096 RNU6-405P-201ENST00000516637 110 ntBASIC1.89□□□□□ -2.11
PTP4A1Q93096 RNU6-323P-201ENST00000521915 107 ntBASIC1.89□□□□□ -2.11
PTP4A1Q93096 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.89□□□□□ -2.11
PTP4A1Q93096 AC104383.1-201ENST00000530297 370 ntBASIC1.89□□□□□ -2.11
PTP4A1Q93096 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.89□□□□□ -2.11
PTP4A1Q93096 AC090517.1-201ENST00000569307 266 ntBASIC1.89□□□□□ -2.11
PTP4A1Q93096 MIR3198-2-201ENST00000577868 80 ntBASIC1.89□□□□□ -2.11
PTP4A1Q93096 MIR3169-201ENST00000578032 83 ntBASIC1.89□□□□□ -2.11
PTP4A1Q93096 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.89□□□□□ -2.11
PTP4A1Q93096 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.89□□□□□ -2.11
PTP4A1Q93096 AL357078.3-201ENST00000607528 618 ntBASIC1.89□□□□□ -2.11
PTP4A1Q93096 MIR6873-201ENST00000622788 63 ntBASIC1.89□□□□□ -2.11
PTP4A1Q93096 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PTP4A1Q93096 RNU6-1085P-201ENST00000363576 107 ntBASIC1.88□□□□□ -2.11
PTP4A1Q93096 RNU6-378P-201ENST00000384324 107 ntBASIC1.88□□□□□ -2.11
PTP4A1Q93096 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.88□□□□□ -2.11
PTP4A1Q93096 TIMM9P3-201ENST00000428659 274 ntBASIC1.88□□□□□ -2.11
PTP4A1Q93096 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.88□□□□□ -2.11
PTP4A1Q93096 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.88□□□□□ -2.11
PTP4A1Q93096 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.88□□□□□ -2.11
PTP4A1Q93096 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.88□□□□□ -2.11
PTP4A1Q93096 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PTP4A1Q93096 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.88□□□□□ -2.11
PTP4A1Q93096 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.88□□□□□ -2.11
PTP4A1Q93096 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.88□□□□□ -2.11
PTP4A1Q93096 NBR2-204ENST00000587322 63 ntBASIC1.88□□□□□ -2.11
PTP4A1Q93096 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.88□□□□□ -2.11
PTP4A1Q93096 MTND4P23-201ENST00000447723 1363 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 SNORD31B-201ENST00000364977 69 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 Y_RNA.381-201ENST00000365666 102 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 XGY1-201ENST00000381172 446 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 RNU6-214P-201ENST00000384130 107 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 SNORD73A-201ENST00000386062 65 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 RNA5SP425-201ENST00000410336 112 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 RNU2-41P-201ENST00000410991 178 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 Z98742.3-201ENST00000418637 326 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 AC091874.1-201ENST00000511402 339 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 AC008834.1-201ENST00000511612 175 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 SNORA19.2-201ENST00000516013 114 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 RNU6-1069P-201ENST00000516612 133 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 SUMO2P18-201ENST00000518873 252 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.87□□□□□ -2.11
PTP4A1Q93096 MIR4513-201ENST00000581077 86 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 AC009994.1-201ENST00000606889 253 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 AL158209.2-201ENST00000619266 216 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 AC064859.1-201ENST00000624741 174 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 MIR6863-201ENST00000636112 90 ntBASIC1.87□□□□□ -2.11
PTP4A1Q93096 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.87□□□□□ -2.11
PTP4A1Q93096 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
PTP4A1Q93096 Y_RNA.132-201ENST00000363421 102 ntBASIC1.86□□□□□ -2.11
PTP4A1Q93096 SNORA69-201ENST00000383895 132 ntBASIC1.86□□□□□ -2.11
PTP4A1Q93096 RNU6-259P-201ENST00000383999 107 ntBASIC1.86□□□□□ -2.11
PTP4A1Q93096 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
PTP4A1Q93096 SNORA11.4-201ENST00000408823 129 ntBASIC1.86□□□□□ -2.11
PTP4A1Q93096 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.86□□□□□ -2.11
PTP4A1Q93096 SNRPEP8-201ENST00000442866 260 ntBASIC1.86□□□□□ -2.11
PTP4A1Q93096 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.86□□□□□ -2.11
PTP4A1Q93096 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.86□□□□□ -2.11
PTP4A1Q93096 AC007395.1-201ENST00000451333 677 ntBASIC1.86□□□□□ -2.11
PTP4A1Q93096 TPT1P7-201ENST00000458300 517 ntBASIC1.86□□□□□ -2.11
PTP4A1Q93096 RPL9P9-202ENST00000466501 579 ntBASIC1.86□□□□□ -2.11
PTP4A1Q93096 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
PTP4A1Q93096 AC021146.2-201ENST00000504736 556 ntBASIC1.86□□□□□ -2.11
PTP4A1Q93096 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.86□□□□□ -2.11
PTP4A1Q93096 HSBP1P1-201ENST00000555205 166 ntBASIC1.86□□□□□ -2.11
PTP4A1Q93096 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.86□□□□□ -2.11
PTP4A1Q93096 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.86□□□□□ -2.11
PTP4A1Q93096 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.86□□□□□ -2.11
PTP4A1Q93096 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.86□□□□□ -2.11
PTP4A1Q93096 AC068944.2-201ENST00000610373 403 ntBASIC1.86□□□□□ -2.11
PTP4A1Q93096 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
PTP4A1Q93096 AL450472.1-202ENST00000637286 180 ntBASIC1.86□□□□□ -2.11
PTP4A1Q93096 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PTP4A1Q93096 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
PTP4A1Q93096 MTND5P26-201ENST00000426018 1752 ntBASIC1.85□□□□□ -2.11
PTP4A1Q93096 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
PTP4A1Q93096 SNORD114-6-201ENST00000364393 72 ntBASIC1.85□□□□□ -2.11
PTP4A1Q93096 RNU6-38P-201ENST00000384085 107 ntBASIC1.85□□□□□ -2.11
PTP4A1Q93096 MIR30A-201ENST00000385092 71 ntBASIC1.85□□□□□ -2.11
PTP4A1Q93096 RNU6-1093P-201ENST00000391194 107 ntBASIC1.85□□□□□ -2.11
PTP4A1Q93096 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
PTP4A1Q93096 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.85□□□□□ -2.11
PTP4A1Q93096 DPH3P2-201ENST00000422618 250 ntBASIC1.85□□□□□ -2.11
PTP4A1Q93096 AC139712.2-201ENST00000424302 339 ntBASIC1.85□□□□□ -2.11
PTP4A1Q93096 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.85□□□□□ -2.11
PTP4A1Q93096 AL359672.1-201ENST00000442302 409 ntBASIC1.85□□□□□ -2.11
PTP4A1Q93096 AL353705.4-201ENST00000449661 238 ntBASIC1.85□□□□□ -2.11
PTP4A1Q93096 AC007547.1-201ENST00000462177 490 ntBASIC1.85□□□□□ -2.11
PTP4A1Q93096 AC027575.1-201ENST00000481064 460 ntBASIC1.85□□□□□ -2.11
PTP4A1Q93096 AC025465.4-201ENST00000513422 638 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms