Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AL714022.1-201ENST00000439897 151 ntBASIC3.76□□□□□ -1.81
BRF1Q92994 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.76□□□□□ -1.81
BRF1Q92994 RPL30P14-201ENST00000482744 348 ntBASIC3.76□□□□□ -1.81
BRF1Q92994 ACA59.2-201ENST00000517061 156 ntBASIC3.76□□□□□ -1.81
BRF1Q92994 RNU6-58P-201ENST00000517143 103 ntBASIC3.76□□□□□ -1.81
BRF1Q92994 AC090897.2-201ENST00000581715 130 ntBASIC3.76□□□□□ -1.81
BRF1Q92994 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.76□□□□□ -1.81
BRF1Q92994 AC019176.2-201ENST00000611579 315 ntBASIC3.76□□□□□ -1.81
BRF1Q92994 uc_338.25-201ENST00000613756 156 ntBASIC3.76□□□□□ -1.81
BRF1Q92994 AC005296.1-201ENST00000616145 209 ntBASIC3.76□□□□□ -1.81
BRF1Q92994 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.76□□□□□ -1.81
BRF1Q92994 MIR3199-2-201ENST00000636243 86 ntBASIC3.76□□□□□ -1.81
BRF1Q92994 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
BRF1Q92994 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
BRF1Q92994 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.75□□□□□ -1.81
BRF1Q92994 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.75□□□□□ -1.81
BRF1Q92994 RNU4-90P-201ENST00000362773 141 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 RNU6-290P-201ENST00000365212 101 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 SNORA48.7-201ENST00000391302 135 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 Y_RNA.602-201ENST00000410535 92 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 YME1L1P1-201ENST00000429435 297 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 AC005002.2-201ENST00000438228 269 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.75□□□□□ -1.81
BRF1Q92994 RPL21P129-201ENST00000491732 478 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 RNU5F-8P-201ENST00000515941 111 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 RNA5SP217-201ENST00000515959 91 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 RNU6-182P-201ENST00000516970 105 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 SNORD19.2-201ENST00000516978 73 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 RN7SKP40-201ENST00000517211 242 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.75□□□□□ -1.81
BRF1Q92994 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.75□□□□□ -1.81
BRF1Q92994 AK6P2-201ENST00000549020 471 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.75□□□□□ -1.81
BRF1Q92994 MIR4423-201ENST00000580922 80 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 AC008739.3-201ENST00000603262 127 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 AC012314.7-201ENST00000619693 93 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 AC127459.3-201ENST00000624328 466 ntBASIC3.75□□□□□ -1.81
BRF1Q92994 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.75□□□□□ -1.81
BRF1Q92994 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
BRF1Q92994 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
BRF1Q92994 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.74□□□□□ -1.81
BRF1Q92994 AC010680.1-201ENST00000590024 3590 ntBASIC3.74□□□□□ -1.81
BRF1Q92994 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
BRF1Q92994 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
BRF1Q92994 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
BRF1Q92994 RNA5SP361-201ENST00000362686 118 ntBASIC3.74□□□□□ -1.81
BRF1Q92994 RNU6-1159P-201ENST00000362933 107 ntBASIC3.74□□□□□ -1.81
BRF1Q92994 RNU6-1145P-201ENST00000384246 107 ntBASIC3.74□□□□□ -1.81
BRF1Q92994 U3.19-201ENST00000390893 196 ntBASIC3.74□□□□□ -1.81
BRF1Q92994 RN7SKP27-201ENST00000410684 333 ntBASIC3.74□□□□□ -1.81
BRF1Q92994 AC005326.1-201ENST00000429197 123 ntBASIC3.74□□□□□ -1.81
BRF1Q92994 WARS2P1-201ENST00000429678 537 ntBASIC3.74□□□□□ -1.81
BRF1Q92994 RPL39P29-201ENST00000447779 157 ntBASIC3.74□□□□□ -1.81
BRF1Q92994 AC012308.1-201ENST00000451232 178 ntBASIC3.74□□□□□ -1.81
BRF1Q92994 HSPE1P25-201ENST00000455484 251 ntBASIC3.74□□□□□ -1.81
BRF1Q92994 AL139109.1-201ENST00000455491 297 ntBASIC3.74□□□□□ -1.81
BRF1Q92994 snoU13.28-201ENST00000459235 104 ntBASIC3.74□□□□□ -1.81
BRF1Q92994 RPL26P26-201ENST00000480251 434 ntBASIC3.74□□□□□ -1.81
BRF1Q92994 SERF1AP1-201ENST00000514575 187 ntBASIC3.74□□□□□ -1.81
BRF1Q92994 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
BRF1Q92994 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.74□□□□□ -1.81
BRF1Q92994 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.74□□□□□ -1.81
BRF1Q92994 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
BRF1Q92994 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
BRF1Q92994 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.73□□□□□ -1.81
BRF1Q92994 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.73□□□□□ -1.81
BRF1Q92994 RNU6-1266P-201ENST00000362794 105 ntBASIC3.73□□□□□ -1.81
BRF1Q92994 RNU6-926P-201ENST00000384075 107 ntBASIC3.73□□□□□ -1.81
BRF1Q92994 RNU6-102P-201ENST00000384485 104 ntBASIC3.73□□□□□ -1.81
BRF1Q92994 MIR329-1-201ENST00000385028 80 ntBASIC3.73□□□□□ -1.81
BRF1Q92994 RNU5A-5P-201ENST00000411054 116 ntBASIC3.73□□□□□ -1.81
BRF1Q92994 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.73□□□□□ -1.81
BRF1Q92994 RNU7-23P-201ENST00000459465 62 ntBASIC3.73□□□□□ -1.81
BRF1Q92994 SNRPGP7-201ENST00000469016 106 ntBASIC3.73□□□□□ -1.81
BRF1Q92994 GZMAP1-201ENST00000503054 631 ntBASIC3.73□□□□□ -1.81
BRF1Q92994 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.73□□□□□ -1.81
BRF1Q92994 SEPT14P8-201ENST00000508026 178 ntBASIC3.73□□□□□ -1.81
BRF1Q92994 RNA5SP54-201ENST00000516951 92 ntBASIC3.73□□□□□ -1.81
BRF1Q92994 AC068657.1-201ENST00000520807 306 ntBASIC3.73□□□□□ -1.81
BRF1Q92994 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BRF1Q92994 AC130289.1-201ENST00000577321 73 ntBASIC3.73□□□□□ -1.81
BRF1Q92994 HMGN2P15-201ENST00000585707 270 ntBASIC3.73□□□□□ -1.81
BRF1Q92994 SNORD113-5-201ENST00000607261 78 ntBASIC3.73□□□□□ -1.81
BRF1Q92994 AL365434.2-201ENST00000607979 234 ntBASIC3.73□□□□□ -1.81
BRF1Q92994 AL359198.2-201ENST00000611836 194 ntBASIC3.73□□□□□ -1.81
BRF1Q92994 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.73□□□□□ -1.81
BRF1Q92994 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BRF1Q92994 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BRF1Q92994 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.73□□□□□ -1.81
BRF1Q92994 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.72□□□□□ -1.81
BRF1Q92994 RBBP8P1-201ENST00000449447 1844 ntBASIC3.72□□□□□ -1.81
BRF1Q92994 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.72□□□□□ -1.81
BRF1Q92994 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.72□□□□□ -1.81
BRF1Q92994 Y_RNA.277-201ENST00000364754 102 ntBASIC3.72□□□□□ -1.81
BRF1Q92994 SNORA36A-201ENST00000384221 132 ntBASIC3.72□□□□□ -1.81
BRF1Q92994 RNVU1-14-201ENST00000384770 164 ntBASIC3.72□□□□□ -1.81
BRF1Q92994 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
BRF1Q92994 AL139156.1-201ENST00000412785 841 ntBASIC3.72□□□□□ -1.81
BRF1Q92994 ARF4P2-201ENST00000430209 526 ntBASIC3.72□□□□□ -1.81
BRF1Q92994 AL353705.1-201ENST00000433468 480 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms