Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.5□□□□□ -1.85
ERCC4Q92889 AC025465.3-201ENST00000510570 311 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 RNU6-1143P-201ENST00000516125 104 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 RNU6-56P-201ENST00000516986 93 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 ACA59.2-201ENST00000517061 156 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 AC091144.1-201ENST00000519573 138 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 AC090617.3-201ENST00000573670 475 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.5□□□□□ -1.85
ERCC4Q92889 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.5□□□□□ -1.85
ERCC4Q92889 AC062037.2-201ENST00000610137 73 ntBASIC3.5□□□□□ -1.85
ERCC4Q92889 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ERCC4Q92889 ADAM3A-203ENST00000461344 2157 ntBASIC3.49□□□□□ -1.85
ERCC4Q92889 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
ERCC4Q92889 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.49□□□□□ -1.85
ERCC4Q92889 RNA5SP387-201ENST00000364226 106 ntBASIC3.49□□□□□ -1.85
ERCC4Q92889 RNU6-1141P-201ENST00000364520 107 ntBASIC3.49□□□□□ -1.85
ERCC4Q92889 RNU6-806P-201ENST00000365147 105 ntBASIC3.49□□□□□ -1.85
ERCC4Q92889 SNORA29-201ENST00000384183 140 ntBASIC3.49□□□□□ -1.85
ERCC4Q92889 Y_RNA.471-201ENST00000384312 102 ntBASIC3.49□□□□□ -1.85
ERCC4Q92889 RNA5SP213-201ENST00000391031 106 ntBASIC3.49□□□□□ -1.85
ERCC4Q92889 RNU7-23P-201ENST00000459465 62 ntBASIC3.49□□□□□ -1.85
ERCC4Q92889 AC010469.2-201ENST00000496412 480 ntBASIC3.49□□□□□ -1.85
ERCC4Q92889 AC067942.3-201ENST00000512025 362 ntBASIC3.49□□□□□ -1.85
ERCC4Q92889 RNU6-1271P-201ENST00000517049 105 ntBASIC3.49□□□□□ -1.85
ERCC4Q92889 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.49□□□□□ -1.85
ERCC4Q92889 AC096577.2-201ENST00000611455 153 ntBASIC3.49□□□□□ -1.85
ERCC4Q92889 AL450472.1-202ENST00000637286 180 ntBASIC3.49□□□□□ -1.85
ERCC4Q92889 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ERCC4Q92889 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
ERCC4Q92889 MAPK10-266ENST00000641066 6555 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 Y_RNA.183-201ENST00000363882 113 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 RNU6-1318P-201ENST00000365389 103 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 Y_RNA.458-201ENST00000384240 102 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 MT-TW-201ENST00000387382 68 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 SNORA26.3-201ENST00000391119 136 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 RNA5SP390-201ENST00000410191 113 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 PCNPP5-201ENST00000452246 481 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.48□□□□□ -1.85
ERCC4Q92889 TOMM22P6-201ENST00000465035 409 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 AC104564.1-201ENST00000493028 407 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.48□□□□□ -1.85
ERCC4Q92889 RNY3P15-201ENST00000516297 97 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 SNORD19.2-201ENST00000516978 73 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.48□□□□□ -1.85
ERCC4Q92889 AC023157.2-201ENST00000540596 141 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.48□□□□□ -1.85
ERCC4Q92889 AC090897.2-201ENST00000581715 130 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 UBL5P2-201ENST00000583788 219 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 AL355877.2-201ENST00000603670 358 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 AC073657.2-201ENST00000605661 303 ntBASIC3.48□□□□□ -1.85
ERCC4Q92889 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.48□□□□□ -1.85
ERCC4Q92889 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.48□□□□□ -1.85
ERCC4Q92889 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.48□□□□□ -1.85
ERCC4Q92889 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.48□□□□□ -1.85
ERCC4Q92889 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.48□□□□□ -1.85
ERCC4Q92889 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.48□□□□□ -1.85
ERCC4Q92889 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.48□□□□□ -1.85
ERCC4Q92889 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
ERCC4Q92889 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ERCC4Q92889 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
ERCC4Q92889 RNU6-858P-201ENST00000362436 107 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 Y_RNA.19-201ENST00000362462 99 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 Y_RNA.64-201ENST00000362845 102 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 RNU6-1285P-201ENST00000363480 105 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 Y_RNA.307-201ENST00000365022 117 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 RNU1-140P-201ENST00000365040 165 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 Y_RNA.333-201ENST00000365274 102 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 RNU6-198P-201ENST00000384258 104 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 RNU6-713P-201ENST00000384761 107 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 MIR544A-201ENST00000384855 91 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 SNORA11.1-201ENST00000408133 129 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 RNU6-121P-201ENST00000410525 99 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 SDAD1P3-201ENST00000427380 333 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.47□□□□□ -1.85
ERCC4Q92889 AL161651.1-201ENST00000440882 223 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 AL353705.4-201ENST00000449661 238 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 LINC01399-202ENST00000458450 244 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.47□□□□□ -1.85
ERCC4Q92889 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.47□□□□□ -1.85
ERCC4Q92889 RNU2-53P-201ENST00000516257 147 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.47□□□□□ -1.85
ERCC4Q92889 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.47□□□□□ -1.85
ERCC4Q92889 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
ERCC4Q92889 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 AC130454.1-201ENST00000622948 401 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 MIR3199-2-201ENST00000636243 86 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 U6.92-201ENST00000636464 89 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.47□□□□□ -1.85
ERCC4Q92889 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
ERCC4Q92889 AC073346.2-201ENST00000624724 2058 ntBASIC3.47□□□□□ -1.85
ERCC4Q92889 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ERCC4Q92889 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
ERCC4Q92889 Y_RNA.105-201ENST00000363182 111 ntBASIC3.46□□□□□ -1.86
ERCC4Q92889 Y_RNA.376-201ENST00000365638 108 ntBASIC3.46□□□□□ -1.86
ERCC4Q92889 RNU6-142P-201ENST00000384019 107 ntBASIC3.46□□□□□ -1.86
ERCC4Q92889 U8.10-201ENST00000384260 133 ntBASIC3.46□□□□□ -1.86
ERCC4Q92889 U3.19-201ENST00000390893 196 ntBASIC3.46□□□□□ -1.86
ERCC4Q92889 RNU1-139P-201ENST00000391307 165 ntBASIC3.46□□□□□ -1.86
ERCC4Q92889 AC078809.1-201ENST00000427601 140 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms